Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1018 ATGGCTTCCTCCAGTGGAACGTCTTCTGGGTCGTCATCTCTGGTTCGAAACTCTGGTTCCGATGAGGACTTGCAGGTCTTGATGGATCAGAGGAAGAGAAAGAGGATGATATCGAATCGTGAATCGGCTAGAAGGTCAAGAATGAGGAAGCAGAAGCATCTGGATGATCTGGTGGCTCAGGTGGCTCAGCTCAGGAAGGAGAATCAGCAGATTCTCACTAGCGTCAACATCACAACCCAGCAATATCTCACCGTCGAGGCTGAGAATTCTGTACTCAGAGCCCAAGTGAACGAGCTGACCCATAGATTGCAATCTCTGAACGAAATTGTGGATTTCCTTAACACAAGTTCTGCAGTTTTTGCAGCTTCAAACTCATCCACCTTCATGGAACCCACCAACAGCTTATTTAACAACCCATTAAACATGGCCTGCCTGAACCAGCCGATCATGGCTTCTGCTGATATGTTTCAGTACTGTTGA 480 0.4729 MASSSGTSSGSSSLVRNSGSDEDLQVLMDQRKRKRMISNRESARRSRMRKQKHLDDLVAQVAQLRKENQQILTSVNITTQQYLTVEAENSVLRAQVNELTHRLQSLNEIVDFLNTSSAVFAASNSSTFMEPTNSLFNNPLNMACLNQPIMASADMFQYC 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1018 159 CDD bZIP_plant_GBF1 32 82 IPR045314 GO:0003700|GO:0006355
Prci11g1018 159 Coils Coil 89 109 - -
Prci11g1018 159 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 29 92 IPR004827 GO:0003700|GO:0006355
Prci11g1018 159 MobiDBLite consensus disorder prediction 1 52 - -
Prci11g1018 159 PANTHER BZIP TRANSCRIPTION FACTOR 44 6 155 - -
Prci11g1018 159 Coils Coil 47 74 - -
Prci11g1018 159 Gene3D - 29 85 - -
Prci11g1018 159 SMART brlzneu 27 91 IPR004827 GO:0003700|GO:0006355
Prci11g1018 159 MobiDBLite consensus disorder prediction 1 24 - -
Prci11g1018 159 SUPERFAMILY Leucine zipper domain 31 83 IPR046347 GO:0003700|GO:0006355
Prci11g1018 159 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 34 49 IPR004827 GO:0003700|GO:0006355
Prci11g1018 159 Pfam bZIP transcription factor 31 75 IPR004827 GO:0003700|GO:0006355
Prci11g1018 159 MobiDBLite consensus disorder prediction 25 52 - -
Prci11g1018 159 FunFam BZIP transcription factor 29 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1018 Prci-Chr11 9097641 9099148 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1018 27 158 bZIP Transcription Factor Family AT4G34590 60.870 1.56e-50 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci11g1018 bZIP_1 2.9e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1018 K25786 - gmx:547956 221.09