Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1004 ATGGCAACTTATTTGCCAAATTCATTTTCTGAGACACCGATTACCTCAAGTAATATAACGTTGTTTATGAACACTGGTTCATATCCAGAGGCATTCACTGGCAATTCTCAGGAGCAAAATAGCTGCTTTGTTATCCCACCAGCCACAGAACAGCAAGAAATCTTAGCAAATCTTGGTGGGTTGCAAACTGGGGACTATGATTTCACTGCTTGGAGACAAGGGAGAAATGAGATGCTAGTAACAAATCCAATGGAAGGACATAACTTGCAGAGCCAGGGATTATCTCTCAGCCTTGGAACCCGAACTCCAACAGGAATCCAAGTGTCTCCTTTCCATGATCAGAGTTCCAATCCAAGTTTCGATTCGTTTTTAGGTCAAAATCCATCAATTTCAGGCCATAAAAGCAGCTCATCCAGGCATGAATGTATGAGGCACAGTGAAATTATGCCACCTGATTTACCTGAAGCTAATCAAGTTTTGAATAGAGGGGATTATTCTTTGCATGGGATGTCGAGTGTTTCAAGAACAATTCCTAATTCCAAGTACCTCAAGGCAGCACAAGAGCTACTTGACGAAGTTGTTGACATCCAAAAAGCAGTAAAACAACCCAATGTGAAGAGTCATGGCACACGTGAAAAGAAGACTTCTAAGGAGAATGATCGAAGACAAGAAAATGAGATGACACCTTCTAATGGAGAGCCTAACCCTCAAGATTTAGCTGGCAACTCCTCTTGCGAGCTTTCGCATGCTGAAAAACAAGATCTGCAGAACAAGTTAACAAAGCTCTTGTCAATGCTGGATGAGGTTCACAATAGGTACAAACAATATTATCATCAGATGCAGATTGTGGTATCGTCATTTGATGTGATAGCAGGACGCGGGGCAGCGAAACCATACACGGCACTGGCTCTCCAAACCATTTCACGTCATTTCCGGTGCTTGCATGATGCAATCACCGGCCAAATCAGTGCGACACAGAAGAGCCTTGGAGAGCAAGATGCTTCAGGAAATAATAAAGGAGTTGGAATATCAAGACTCCGATATGTTGATCAACAAATCCGGCAACAGAGGGCTCTCCAGCAGCTTGGAGTGATGCATCATGCATGGAGGCCACAAAGGGGACTACCAGAAGGCTCTGTTTCAATTCTTCGTGCCTGGCTCTTTGAACATTTCCTTCATCCCTACCCGAAAGATTCTGAAAAGGCAATGCTAGCAAGGCAGACAGGCTTGACTAGAAGTCAGGTCTCAAATTGGTTTATAAATGCACGAGTTCGTCTTTGGAAACCTATGATTGAGGAGATGTACAAGGAAGAAATTGGCGATGCTGACTTGCACTCCACTTCTTCAACTGAAGATGCATCCAAGGTAAGCAAAAGTGATGTCAAGGTCTCCGATGATGGGTGTGATGATTTGCAACAGAGCCAGAGTTCAGTAGCCGACAAGAATAGCAATGTTGGACAAGCTAAGGACTTGAGATCTGATAAGCAAACTGAGGAGCAGCAAAGGCTTAGCTTTGATGACTGTAGTGTCTTCCAAGGTGACACGGTTGTTCAGACCAATGAAGGAAGTGCTGGGTTTATAGCAGTTGCTCCGGCATGCCAGATGTCCGAGTTGGGGAGGTTTCAATCTGGAAATGGGGTGTCACTGACATTAGGTTTGCAGCATTGTGAAGTTGGTGATTTTATGTCTGGTGAGAGCCGCCATAGTTTTGTTGTCATGAGGGAGGATGGCATTTACAATGCCGCCTCAGCTGCGACCATTGGAGCTCAGACATCAGAACTTGATTGTGTTGCTGCTGGAAACCAGCACCAAAGGTTCACCACGCGCCATTGA 1833 0.4468 MATYLPNSFSETPITSSNITLFMNTGSYPEAFTGNSQEQNSCFVIPPATEQQEILANLGGLQTGDYDFTAWRQGRNEMLVTNPMEGHNLQSQGLSLSLGTRTPTGIQVSPFHDQSSNPSFDSFLGQNPSISGHKSSSSRHECMRHSEIMPPDLPEANQVLNRGDYSLHGMSSVSRTIPNSKYLKAAQELLDEVVDIQKAVKQPNVKSHGTREKKTSKENDRRQENEMTPSNGEPNPQDLAGNSSCELSHAEKQDLQNKLTKLLSMLDEVHNRYKQYYHQMQIVVSSFDVIAGRGAAKPYTALALQTISRHFRCLHDAITGQISATQKSLGEQDASGNNKGVGISRLRYVDQQIRQQRALQQLGVMHHAWRPQRGLPEGSVSILRAWLFEHFLHPYPKDSEKAMLARQTGLTRSQVSNWFINARVRLWKPMIEEMYKEEIGDADLHSTSSTEDASKVSKSDVKVSDDGCDDLQQSQSSVADKNSNVGQAKDLRSDKQTEEQQRLSFDDCSVFQGDTVVQTNEGSAGFIAVAPACQMSELGRFQSGNGVSLTLGLQHCEVGDFMSGESRHSFVVMREDGIYNAASAATIGAQTSELDCVAAGNQHQRFTTRH 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1004 610 Gene3D - 365 443 - -
Prci11g1004 610 MobiDBLite consensus disorder prediction 444 500 - -
Prci11g1004 610 ProSiteProfiles 'Homeobox' domain profile. 366 429 IPR001356 GO:0003677
Prci11g1004 610 MobiDBLite consensus disorder prediction 201 251 - -
Prci11g1004 610 Coils Coil 252 272 - -
Prci11g1004 610 Pfam Associated with HOX 177 319 IPR006563 -
Prci11g1004 610 MobiDBLite consensus disorder prediction 468 486 - -
Prci11g1004 610 SMART prehox3 171 320 IPR006563 -
Prci11g1004 610 SUPERFAMILY Homeodomain-like 371 436 IPR009057 -
Prci11g1004 610 SMART HOX_1 369 433 IPR001356 GO:0003677
Prci11g1004 610 MobiDBLite consensus disorder prediction 205 227 - -
Prci11g1004 610 Pfam Homeobox KN domain 386 425 IPR008422 GO:0003677|GO:0006355
Prci11g1004 610 CDD homeodomain 369 430 IPR001356 GO:0003677
Prci11g1004 610 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 119 456 - -
Prci11g1004 610 MobiDBLite consensus disorder prediction 228 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1004 Prci-Chr11 9014740 9020085 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1004 48 570 Homeobox Transcription Factor Family AT4G34610 45.572 2.22e-125 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Prci11g1004 POX 7.6e-50 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1004 - - gmx:100801522 745.732