Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0998 ATGGCTTCTGACTCTTCTCCGACGAATTTCAATAACGGTCCTTCCTCTCCCGATGATTCGTTTTCCAGCCCAATTGGCAACACATTATCCTCTCCCGGTGATGCTGCTCGCCACAGAGGGCGCGGGCGTTCTTCAACACCGTCTGCGTTCGCAACTCCTCCGTCTAATCGATCTCGATTCGCCTCATCCGATGCTACCCCAACTCCATCGAGGTCAAGGCAAAGGGGAGGTGGTCGGAGAGGGTCCATGTCCACCCCTGTTGCAGCCACGCCCACATCCACGGATGACGTGCCTTTGTCATCAGAAGGAGGTGAGGGCTACAGTGCGGACGATGTTAGGCCTACCTTCGTCTGGGGTACTAATATAAGCGTCGAAGACGTGAATGAGGCGATTCAGAGGTTTTTAAAGCACTTCAGAGAGCATTCATCTCAGAGTGATGGGCTGCACATGGAGGGGAAATACGAGACGGCTATCAAACAAGTCATTGAAATTGAGGGGGATTCACTAGACGTTGATGCTCACGATGTATTTGATTATGATCCGGACTTGTACACAAAAATGGTCAGATACCCACTCGAGGTTCTTGCAATTTTTGATTTGGTTCTGATGAATATGGTTAGTAGAATCAACCCGTTGTTCGAGAAGCACATTCAAACTCGAATTTTTAATCTAAAATCCTCAACTTCTATGAGAAATTTGAATCCATCTGATATTGAGAGGATGGTATCATTGAAGGGAATGATTATTCGATGTAGCTCAATTATACCGGAAATCAGGGAAGCTATATTCAGATGCCTCGTGTGTGGATACTGCTCAGAACCCGTTGCTGTCGAGAGAGGGCGAATATCTGAACCTACTAAATGTTTGAGGGAAGAGTGTCAAGCCAGAAACTCCATGACACTGGTTCACAACCGATGCAGATTCACAGACAAGCAAATTGTGAGGCTCCAGGAGACACCTGATGAGATACCTGAAGGGGGAACACCACACACAGTAAGCTTGCTGATGCATGACAAGCTGGTGGATGCTGGAAAGCCGGGTGACAGAGTTGAGGTGACTGGTATATATAGGGCCATGAGTGTCAGGGTTGGACCAACTCAAAGAACTGTTAAATCACTGTTCAAGACTTATATCGATTGTCTTCATATTAAGAAGACTGATAAGTCAAGAATGCTTTCAGAGGATGCAATGGATGTTGAAACTAGCCTGGGCAACAGAAATACAGGAGAAATTCATTTTGATGAAGAGAAGGTGGCTCAACTAAAAGAGCTCTCAAAACAGCCAGATATATACGAAAGACTGACAAAGTCGTTGGCTCCAAACATCTGGGAGCTAGATGATGTGAAGAAAGGTCTTCTTTGCCAGCTTTTTGGTGGAAATGCTTTGAAGTTGGCATCTGGTGCTAACTTCCGTGGAGACCTTAATATTTTATTAGTTGGTGATCCTGGAACCAGTAAGTCCCAGCTGCTCCAATACATACATAAACTTTCTCCACGTGGCATTTACACAAGTGGAAGGGGGAGCTCTGCAGTTGGACTGACTGCTTATGTTACCAAAGATCCTGAAACAGGCGAAACTGTTCTAGAGAGTGGTGCTCTAGTTTTAAGTGACAGGGGCATCTGCTGTATAGATGAATTTGACAAAATGTCCGAGAATGCCAGGAGCATGTTGCATGAGGTGATGGAACAACAAACTGTTTCAATAGCAAAGGCGGGTATTATTGCGTCTCTCAATGCCAGGACTTCAGTGTTGGCTTGCGCAAATCCCAGCGGGTCGCGATACAACCCTCGCTTGTCCGTCATTGACAACATACAACTTCCTCCTACACTTCTGTCCAGGTTTGATTTGATCTACTTAATTCTTGACAAGGCTGATGAACAGACAGATAGACGACTTGCCAAGCATATTGTTTCCTTACACTTTGAGAATCCTGAGAGCTTAGAGCAAGATGTGTTGGATCTTCCTACATTAACTACTTATGTGAGCTATGCTCGAAAGCATATACACCCACAACTATCTGACGAAGCTGCTGAAGAATTAACTAGAGGTTATGTTGAGATAAGGAGAAGAGGAAATTTTCCAGGGAGTAGCAAGAAGGTGATAACAGCAACACCAAGGCAGATTGAGAGTCTGATACGGCTTAGTGAAGCCCTGGCTCGGATTCGCTTCTCAGAATGGGTGGAAAAGCGGGATGTAATGGAGGCATTTCGGCTTCTGGAAGTTGCAATGCAGCAGTCAGCCACAGATCACTCCACTGGAACCATTGACATGGATCTTATTACTACTGGAGTTTCTGCAAGTGAAAGGATGAGACGAGAAAGTCTGGTACAAGCAACTCGCAACATAGTTATGGAGAAGATGCAAATTGGGGGGCCATCAATGAGATTATTGGAGTTACTTGAAGAGTTGAAGAAACAGAACGCCAGCGAACTCCACCTCAGTGATCTAAGAAATGCAGTTGCTACTCTGGCCAGCGAAGGATTTGTTTCTCTGCATGGTGACAGTATTAAAAGATCGTGA 2520 0.454 MASDSSPTNFNNGPSSPDDSFSSPIGNTLSSPGDAARHRGRGRSSTPSAFATPPSNRSRFASSDATPTPSRSRQRGGGRRGSMSTPVAATPTSTDDVPLSSEGGEGYSADDVRPTFVWGTNISVEDVNEAIQRFLKHFREHSSQSDGLHMEGKYETAIKQVIEIEGDSLDVDAHDVFDYDPDLYTKMVRYPLEVLAIFDLVLMNMVSRINPLFEKHIQTRIFNLKSSTSMRNLNPSDIERMVSLKGMIIRCSSIIPEIREAIFRCLVCGYCSEPVAVERGRISEPTKCLREECQARNSMTLVHNRCRFTDKQIVRLQETPDEIPEGGTPHTVSLLMHDKLVDAGKPGDRVEVTGIYRAMSVRVGPTQRTVKSLFKTYIDCLHIKKTDKSRMLSEDAMDVETSLGNRNTGEIHFDEEKVAQLKELSKQPDIYERLTKSLAPNIWELDDVKKGLLCQLFGGNALKLASGANFRGDLNILLVGDPGTSKSQLLQYIHKLSPRGIYTSGRGSSAVGLTAYVTKDPETGETVLESGALVLSDRGICCIDEFDKMSENARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSGSRYNPRLSVIDNIQLPPTLLSRFDLIYLILDKADEQTDRRLAKHIVSLHFENPESLEQDVLDLPTLTTYVSYARKHIHPQLSDEAAEELTRGYVEIRRRGNFPGSSKKVITATPRQIESLIRLSEALARIRFSEWVEKRDVMEAFRLLEVAMQQSATDHSTGTIDMDLITTGVSASERMRRESLVQATRNIVMEKMQIGGPSMRLLELLEELKKQNASELHLSDLRNAVATLASEGFVSLHGDSIKRS 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0998 839 CDD MCM4 433 742 - -
Prci11g0998 839 FunFam DNA helicase 411 749 - -
Prci11g0998 839 ProSitePatterns MCM family signature. 539 547 IPR018525 GO:0003677|GO:0005524|GO:0006260
Prci11g0998 839 Gene3D - 230 369 IPR012340 -
Prci11g0998 839 MobiDBLite consensus disorder prediction 1 108 - -
Prci11g0998 839 Pfam MCM P-loop domain 418 640 IPR001208 GO:0003677|GO:0005524|GO:0032508
Prci11g0998 839 Pfam MCM OB domain 230 359 IPR033762 -
Prci11g0998 839 FunFam DNA helicase 257 309 - -
Prci11g0998 839 Pfam MCM AAA-lid domain 656 742 IPR041562 -
Prci11g0998 839 Gene3D - 414 748 IPR027417 -
Prci11g0998 839 Gene3D - 749 830 IPR036388 -
Prci11g0998 839 PRINTS Mini-chromosome maintenance (MCM) protein family signature 559 572 IPR001208 GO:0003677|GO:0005524|GO:0032508
Prci11g0998 839 PRINTS Mini-chromosome maintenance (MCM) protein family signature 471 486 IPR001208 GO:0003677|GO:0005524|GO:0032508
Prci11g0998 839 PRINTS Mini-chromosome maintenance (MCM) protein family signature 531 545 IPR001208 GO:0003677|GO:0005524|GO:0032508
Prci11g0998 839 PRINTS Mini-chromosome maintenance (MCM) protein family signature 583 595 IPR001208 GO:0003677|GO:0005524|GO:0032508
Prci11g0998 839 PRINTS Mini-chromosome maintenance (MCM) protein family signature 610 618 IPR001208 GO:0003677|GO:0005524|GO:0032508
Prci11g0998 839 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 446 457 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Prci11g0998 839 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 303 315 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Prci11g0998 839 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 252 265 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Prci11g0998 839 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 744 753 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Prci11g0998 839 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 592 609 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Prci11g0998 839 ProSiteProfiles MCM family domain profile. 430 636 IPR001208 GO:0003677|GO:0005524|GO:0032508
Prci11g0998 839 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 128 802 IPR031327 GO:0003677|GO:0005524|GO:0032508
Prci11g0998 839 Pfam MCM N-terminal domain 129 226 IPR027925 -
Prci11g0998 839 Gene3D - 121 224 - -
Prci11g0998 839 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 441 756 IPR027417 -
Prci11g0998 839 SUPERFAMILY Nucleic acid-binding proteins 148 380 IPR012340 -
Prci11g0998 839 Gene3D - 257 309 - -
Prci11g0998 839 SMART mcm 226 744 IPR031327 GO:0003677|GO:0005524|GO:0032508
Prci11g0998 839 MobiDBLite consensus disorder prediction 45 99 - -
Prci11g0998 839 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0998 Prci-Chr11 8941098 8947509 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0998 1 838 Core DNA Replication Machinery Family AT2G16440 76.179 0.0 1292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0998 K02212 - qsa:O6P43_011555 1422.53