Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0997 ATGGAAGGGGGAGAAGTACGACTAGCGAGGAGTGGGAATAAGTGCCAAGACTGTGGGAACCAAGCGAAGAAAGGCTGTGAATACAAGAGATGCAGAACTTGCTGCAACAACAAAGGCTTCGAGTGCGAAACACATGTTCACAGCACTTGGGTTCCTGTGGATCGGAGAAGACGCCATACAAGGCACAACCACAACAACCCCTATCCAGACAAAAAGGTGTTGAAGTTTCCAGGTTGGTTGAGCATGACAGCTATGTTTCGGTGCGTACAAGTGAGATCAAGGGATGATTGGGTGAATGAATATGCGTACCATACGTCGGTGACGATTGGAGGACGTGTGTTCTGTGGTCTTGTATATGATCAAGGACCTTCTCAAGATCATGGTGGTGTTGTTGGTGAGACTTCCTCATCAGTCCCTCTTATTCTTCAACATAACAATCCAATCAACGTGCCAGCAGACACCCATATTGATGCTGCAACAATAGTGGCTCCTCCATTATCATCGTCTTCTGCTCGTGACTCTGCCATTCATCCAACATATTCTTTTCCCTTTCCTTCTATGCCTTATTTCTCGAGCCCCCACCCTTAA 588 0.4694 MEGGEVRLARSGNKCQDCGNQAKKGCEYKRCRTCCNNKGFECETHVHSTWVPVDRRRRHTRHNHNNPYPDKKVLKFPGWLSMTAMFRCVQVRSRDDWVNEYAYHTSVTIGGRVFCGLVYDQGPSQDHGGVVGETSSSVPLILQHNNPINVPADTHIDAATIVAPPLSSSSARDSAIHPTYSFPFPSMPYFSSPHP 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0997 195 Pfam Domain of unknown function (DUF702) 73 124 - -
Prci11g0997 195 Pfam Domain of unknown function (DUF702) 12 63 - -
Prci11g0997 195 NCBIfam LRP1 C-terminal domain 75 123 IPR006511 -
Prci11g0997 195 NCBIfam putative zinc finger domain, LRP1 type 14 56 IPR006510 -
Prci11g0997 195 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 11 160 IPR007818 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0997 Prci-Chr11 8936270 8937922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0997 12 142 C2H2 Transcription Factor Family AT2G21400 41.212 2.96e-34 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Prci11g0997 DUF702 9.6e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0997 - - pcin:129285032 379.793