Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0989 ATGAAGATACTTTGTGACGTGTGTGACAGAGCTGAGGCCTCTCTGTTCTGTCCCTCCGACGAAGCTGCTCTCTGCTACGCCTGTGATCGCACCATCCACCATGCCAACAAGCTCTCTCGCAAACATTATCGCTTCTCTCTTCACCATCCTTCCTCTAATTTCTCTCCTCTCTGCGATATCTGTCAAGAGAGGAGAGCGTATCTGTTCTGCAAAGAGGACAGAGCAATACTGTGCAGAGAATGTGACATTCCTATCCACAGAGCCAGCGAGCATACTCGGAAACATAACAGGTTTCTTCTCACTGGTGTGAAGATCTCTGCTTCAACCTCAAGCTCTGATTCGCAATCCAACGTGAAGAGACACAGATCATCATTTTCTAGCGAGAATGCTTATTCTTCAATGGTGGTGAATAGTTCTCTATTGGCCTCAGCGACTGGCAATGGCAGCGTTGAAGACCAGTGCATAATTAGTAAAACCAGTTCAGTTTTGACAAGCAGCATTTCTGAATACTTGATCGAGAAGATACCTGGTTATTGCTTTGAAGATCTTCTTGATGCTTCTTCATTCCCTCCACCTAATGGTTTCTGTTAG 591 0.4552 MKILCDVCDRAEASLFCPSDEAALCYACDRTIHHANKLSRKHYRFSLHHPSSNFSPLCDICQERRAYLFCKEDRAILCRECDIPIHRASEHTRKHNRFLLTGVKISASTSSSDSQSNVKRHRSSFSSENAYSSMVVNSSLLASATGNGSVEDQCIISKTSSVLTSSISEYLIEKIPGYCFEDLLDASSFPPPNGFC 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0989 196 Pfam B-box zinc finger 55 93 IPR000315 GO:0008270
Prci11g0989 196 Pfam B-box zinc finger 4 42 IPR000315 GO:0008270
Prci11g0989 196 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Prci11g0989 196 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 187 - -
Prci11g0989 196 CDD Bbox1_BBX-like 57 100 - -
Prci11g0989 196 FunFam B-box zinc finger protein 21 1 98 - -
Prci11g0989 196 Gene3D Classic Zinc Finger 1 100 - -
Prci11g0989 196 CDD Bbox1_BBX-like 4 47 - -
Prci11g0989 196 ProSiteProfiles Zinc finger B-box type profile. 53 100 IPR000315 GO:0008270
Prci11g0989 196 SMART bboxneu5 53 100 IPR000315 GO:0008270
Prci11g0989 196 SMART bboxneu5 4 47 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0989 Prci-Chr11 8893864 8895378 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0989 1 188 C2C2-CO-like Transcription Factor Family AT4G39070 53.695 5.92e-57 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Prci11g0989 zf-B_box 1.9e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0989 - - gmx:100800981 238.424