Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0971 ATGCGAACACTTTGTGATGTTTGTGAGAGCGCTGCAGCGATCATCTTCTGTGCTGCAGACGAGGCTGCTTTATGCCGTGCGTGCGACGAAAAGGTCCATACATGCAACAAGCTTGCTAGTAAACATGTGCGGGTTGGGCTGGCTGACCCCACTGATGTTCCCCGCTGTGACATATGTGAAAATGCACCTGCTTTCTTTTACTGTGAGATAGATGGTAGTTCGTTGTGTCTGCAATGTGACATGATAGTACATGTTGGTGGTAAAAGAACCCATGAAAGATATCTTCTATTGAGGCAAAGAGTTGAGTTTCCAGGTGACAGACCTGGTCGATTGGAAGAACTAGGGTTGCAACCCCTTGATCAAAATGAATTAAAGAAGGACCAAAGTCAGCCCCTTAAGCTAATAACAAGAGATGGCCAGCAGAACCATCGGGTTTCACCTGCTCCAATTCTAGAAAATAATGTTGTTGATCATGGAAAGGTGGATAAAAAACTAATTGATCTTAATACTAGACCACAACGGTTAAATGGACCAACATCAAACAATCAGGAACCAGAACAAGAACCGGCTATGGATATTTCAAGTGGCAACAACAATGAATCTGTGGTACCTGTAGAATCCTTCAAATGTTAG 633 0.4344 MRTLCDVCESAAAIIFCAADEAALCRACDEKVHTCNKLASKHVRVGLADPTDVPRCDICENAPAFFYCEIDGSSLCLQCDMIVHVGGKRTHERYLLLRQRVEFPGDRPGRLEELGLQPLDQNELKKDQSQPLKLITRDGQQNHRVSPAPILENNVVDHGKVDKKLIDLNTRPQRLNGPTSNNQEPEQEPAMDISSGNNNESVVPVESFKC 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0971 210 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Prci11g0971 210 Pfam B-box zinc finger 3 44 IPR000315 GO:0008270
Prci11g0971 210 Pfam B-box zinc finger 53 92 IPR000315 GO:0008270
Prci11g0971 210 Gene3D Classic Zinc Finger 2 95 - -
Prci11g0971 210 MobiDBLite consensus disorder prediction 165 210 - -
Prci11g0971 210 SMART bboxneu5 1 47 IPR000315 GO:0008270
Prci11g0971 210 SMART bboxneu5 51 96 IPR000315 GO:0008270
Prci11g0971 210 MobiDBLite consensus disorder prediction 172 204 - -
Prci11g0971 210 CDD Bbox1_BBX-like 56 96 - -
Prci11g0971 210 FunFam B-box zinc finger protein 19 2 92 - -
Prci11g0971 210 CDD Bbox1_BBX-like 4 47 - -
Prci11g0971 210 ProSiteProfiles Zinc finger B-box type profile. 51 96 IPR000315 GO:0008270
Prci11g0971 210 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0971 Prci-Chr11 8704325 8707878 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0971 1 209 C2C2-CO-like Transcription Factor Family AT4G38960 59.716 6.48e-80 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Prci11g0971 zf-B_box 3.4e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0971 - - gmx:100527369 333.183