Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0935 ATGGATTCACAATCACTTAACTCTCAAGTCATCTCAGAAGATCAGTGCACCAGTTCTGCTAAAAACCGCGAAGCGAACAAGTCTTTAGAATCAAAGCTTCGAGTTTCCCTTGGTGCTCATGAATTCTTCAGTCCAGAGATGTGGAAGGCAGCTTTGACAGAGTTAACAGCAACAGCATGCTTACTGTTCACCTTGACCACTTCCATTATAGCTTGCTTGGACTCACACGAGAGTGATCCCAAGCTTCTTGTTCCTTTTGCGGTATTCATCATAGCCTTCCTCTTCTTATTGGTCACTGTCCCTCTCTCTGGAGGCCACATGAGTCCAGTTTTCACATTCATCGCTACTCTCAAGGGTGTCATAACTCTCTCTCGCGCTCTCATCTACATATTCTCACAATGCATCGGCTCAATCATTTGCTTCTTGATCATTAAGAGTGTCATGCAGCAAAGACTGGCAGATTCATATTATTTAGGAGGCTGTGCTATTAGTGACATGAAGAAAGAAAAAGCCTTACTGCTAGAGTTTTGCTGCACGTTCGTGGTTCTTTTTGTGGGAGTCACGCTGGCTTTTGACAAGAGGAGGTCTAAGGATTTGGGTTTGCCAATGGTGTGTGTGGTGGTGGCAGGCGCCATGGCTGTAGCGGTATTCGTGTCCATCACAGTGACCGGGCAAGTCGGGTATGCGGGTGTGGGCTTGAATCCAGCAAGATGCTTGGGCCCTGCATTGCTTCAAGGAGGCCCACTGTGGAATGGACATTGGATTTTCTGGGTTGGGCCCTTCTTGGCATGTCTTTTGTATTATGGTGTGTCCATCAACTTACCAACGGAGGATTTGGTTTGTGTGGCTGGGGAGGGTGATATCTTAAAGTTAGGTTTGGACTTGTGTTCTGCAAAATTAGCTGGTAGTATAAGAGACTAA 921 0.4625 MDSQSLNSQVISEDQCTSSAKNREANKSLESKLRVSLGAHEFFSPEMWKAALTELTATACLLFTLTTSIIACLDSHESDPKLLVPFAVFIIAFLFLLVTVPLSGGHMSPVFTFIATLKGVITLSRALIYIFSQCIGSIICFLIIKSVMQQRLADSYYLGGCAISDMKKEKALLLEFCCTFVVLFVGVTLAFDKRRSKDLGLPMVCVVVAGAMAVAVFVSITVTGQVGYAGVGLNPARCLGPALLQGGPLWNGHWIFWVGPFLACLLYYGVSINLPTEDLVCVAGEGDILKLGLDLCSAKLAGSIRD 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0935 306 PRINTS Major intrinsic protein family signature 125 144 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci11g0935 306 PRINTS Major intrinsic protein family signature 215 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci11g0935 306 PRINTS Major intrinsic protein family signature 88 112 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci11g0935 306 PRINTS Major intrinsic protein family signature 49 68 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci11g0935 306 PRINTS Major intrinsic protein family signature 174 192 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci11g0935 306 PRINTS Major intrinsic protein family signature 254 274 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci11g0935 306 SUPERFAMILY Aquaporin-like 40 266 IPR023271 -
Prci11g0935 306 MobiDBLite consensus disorder prediction 1 23 - -
Prci11g0935 306 Gene3D Glycerol uptake facilitator protein. 6 276 IPR023271 -
Prci11g0935 306 PANTHER AQUAPORIN-LIKE 13 291 - -
Prci11g0935 306 Pfam Major intrinsic protein 44 263 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0935 Prci-Chr11 8507665 8508707 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0935 41 266 Major Intrinsic Protein MIP AT3G61430 30.380 7.21e-23 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0935 K09866 - gmx:100804160 375.17