Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0929 ATGGACTGTACAGCTGCTAGAAAAACTCAAAAGGCTGACAGAGAAAAATTGAGGAGGGACCGGCTCAATGAACAGTTTGTAGAATTGGGTAGCATTTTAGATCCTGATAGGCCCAAAAATGACAAAGCAACCATTCTTGTTGATACAATCCAATTGCTGAAGGACCTTACTGCGCAAGTTAGTAAACTCAAAGAGGAATATGCAATGCTGACTGAAGAATCCCAAGAGTTGACTCAGGAGAAAAATGATCTTAGGGAAGAGAAGGCCTCTCTTAAATCAGACATTGAGAGCTTGAATAACCAATACCAGCAGCGTCTCAGGACTACTTTCCCTTGGACTGCAATGGATCACTCAGTTATGATGGCTCCACCTTCATATCCATATCCAGTGCCAGTGCCAGTGGCAATCCCTCCTGGTCCAATTCCTATGCATCCACCCATGCAGCCATACCCCTTCTTTGCAAATCAAAATCCTGGGGTCATCCCAAATCCGCGTTCAACCTTTGTTCCTTATCCGGCCCCTAATGCTCTTGTTGAACATCAGTCCGCGCAATATGTAACCCTCCCACTTCCTCCAGGTAACCATTCCCATGCACCAGGAACACAAGATTCCAGAAACAAATCATCCAGGGAGAGCAAGGTTGAAAATGATGAATGTGCTAATGATGTCACCACAGACCTGGAGTTGAAAACTCCTGGATCTACGACAGATCAGGAGTTTTCATCTGGGAAACGAAAATCCAGCAGGTTGTCCAAGAAGGAAAGCGGTTACACAGAAGGGAGTTCATCTGGCAGGTGTTCTTCCTCTCATAGCTTACAGGATAGCTCATCAAGTAGCGTAATTGGGAGCAGAAAAGCTGATGAATGA 867 0.4521 MDCTAARKTQKADREKLRRDRLNEQFVELGSILDPDRPKNDKATILVDTIQLLKDLTAQVSKLKEEYAMLTEESQELTQEKNDLREEKASLKSDIESLNNQYQQRLRTTFPWTAMDHSVMMAPPSYPYPVPVPVAIPPGPIPMHPPMQPYPFFANQNPGVIPNPRSTFVPYPAPNALVEHQSAQYVTLPLPPGNHSHAPGTQDSRNKSSRESKVENDECANDVTTDLELKTPGSTTDQEFSSGKRKSSRLSKKESGYTEGSSSGRCSSSHSLQDSSSSSVIGSRKADE 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0929 288 MobiDBLite consensus disorder prediction 204 224 - -
Prci11g0929 288 Gene3D - 5 89 IPR036638 GO:0046983
Prci11g0929 288 SMART finulus 12 62 IPR011598 GO:0046983
Prci11g0929 288 Coils Coil 5 25 - -
Prci11g0929 288 PANTHER TRANSCRIPTION FACTOR BHLH121 2 286 IPR044579 GO:0003700|GO:0006879
Prci11g0929 288 MobiDBLite consensus disorder prediction 254 288 - -
Prci11g0929 288 MobiDBLite consensus disorder prediction 187 288 - -
Prci11g0929 288 Pfam Helix-loop-helix DNA-binding domain 7 56 IPR011598 GO:0046983
Prci11g0929 288 CDD bHLH_AtILR3_like 11 85 - -
Prci11g0929 288 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 6 77 IPR036638 GO:0046983
Prci11g0929 288 Coils Coil 46 108 - -
Prci11g0929 288 MobiDBLite consensus disorder prediction 227 241 - -
Prci11g0929 288 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 6 56 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0929 Prci-Chr11 8473871 8476641 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0929 4 252 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 60.800 6.68e-94 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Prci11g0929 HLH 2.6e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0929 - - cam:101491902 371.703