Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci11g0929 | ATGGACTGTACAGCTGCTAGAAAAACTCAAAAGGCTGACAGAGAAAAATTGAGGAGGGACCGGCTCAATGAACAGTTTGTAGAATTGGGTAGCATTTTAGATCCTGATAGGCCCAAAAATGACAAAGCAACCATTCTTGTTGATACAATCCAATTGCTGAAGGACCTTACTGCGCAAGTTAGTAAACTCAAAGAGGAATATGCAATGCTGACTGAAGAATCCCAAGAGTTGACTCAGGAGAAAAATGATCTTAGGGAAGAGAAGGCCTCTCTTAAATCAGACATTGAGAGCTTGAATAACCAATACCAGCAGCGTCTCAGGACTACTTTCCCTTGGACTGCAATGGATCACTCAGTTATGATGGCTCCACCTTCATATCCATATCCAGTGCCAGTGCCAGTGGCAATCCCTCCTGGTCCAATTCCTATGCATCCACCCATGCAGCCATACCCCTTCTTTGCAAATCAAAATCCTGGGGTCATCCCAAATCCGCGTTCAACCTTTGTTCCTTATCCGGCCCCTAATGCTCTTGTTGAACATCAGTCCGCGCAATATGTAACCCTCCCACTTCCTCCAGGTAACCATTCCCATGCACCAGGAACACAAGATTCCAGAAACAAATCATCCAGGGAGAGCAAGGTTGAAAATGATGAATGTGCTAATGATGTCACCACAGACCTGGAGTTGAAAACTCCTGGATCTACGACAGATCAGGAGTTTTCATCTGGGAAACGAAAATCCAGCAGGTTGTCCAAGAAGGAAAGCGGTTACACAGAAGGGAGTTCATCTGGCAGGTGTTCTTCCTCTCATAGCTTACAGGATAGCTCATCAAGTAGCGTAATTGGGAGCAGAAAAGCTGATGAATGA | 867 | 0.4521 | MDCTAARKTQKADREKLRRDRLNEQFVELGSILDPDRPKNDKATILVDTIQLLKDLTAQVSKLKEEYAMLTEESQELTQEKNDLREEKASLKSDIESLNNQYQQRLRTTFPWTAMDHSVMMAPPSYPYPVPVPVAIPPGPIPMHPPMQPYPFFANQNPGVIPNPRSTFVPYPAPNALVEHQSAQYVTLPLPPGNHSHAPGTQDSRNKSSRESKVENDECANDVTTDLELKTPGSTTDQEFSSGKRKSSRLSKKESGYTEGSSSGRCSSSHSLQDSSSSSVIGSRKADE | 288 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci11g0929 | 288 | MobiDBLite | consensus disorder prediction | 204 | 224 | - | - | |
Prci11g0929 | 288 | Gene3D | - | 5 | 89 | IPR036638 | GO:0046983 | |
Prci11g0929 | 288 | SMART | finulus | 12 | 62 | IPR011598 | GO:0046983 | |
Prci11g0929 | 288 | Coils | Coil | 5 | 25 | - | - | |
Prci11g0929 | 288 | PANTHER | TRANSCRIPTION FACTOR BHLH121 | 2 | 286 | IPR044579 | GO:0003700|GO:0006879 | |
Prci11g0929 | 288 | MobiDBLite | consensus disorder prediction | 254 | 288 | - | - | |
Prci11g0929 | 288 | MobiDBLite | consensus disorder prediction | 187 | 288 | - | - | |
Prci11g0929 | 288 | Pfam | Helix-loop-helix DNA-binding domain | 7 | 56 | IPR011598 | GO:0046983 | |
Prci11g0929 | 288 | CDD | bHLH_AtILR3_like | 11 | 85 | - | - | |
Prci11g0929 | 288 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 6 | 77 | IPR036638 | GO:0046983 | |
Prci11g0929 | 288 | Coils | Coil | 46 | 108 | - | - | |
Prci11g0929 | 288 | MobiDBLite | consensus disorder prediction | 227 | 241 | - | - | |
Prci11g0929 | 288 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 6 | 56 | IPR011598 | GO:0046983 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci11g0929 | Prci-Chr11 | 8473871 | 8476641 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci11g0929 | 4 | 252 | Basic Helix-Loop-Helix Transcription Factor Gene Family | AT3G19860 | 60.800 | 6.68e-94 | 278 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bHLH | Prci11g0929 | HLH | 2.6e-09 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci11g0929 | - | - | cam:101491902 | 371.703 |