LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci11g0922	ATGGCAAACCCTAAGGTCTTCTTCGACATAACCATCGGAGGTCAGCCCGCCGGCCGCGTAGTCATGGAGCTCTTCGCGGATACGACCCCGAAGACCGCTGAGAACTTCCGTGCCCTCTGCACCGGCGAGAAGGGAGTCGGCCGCAGCGGCAAGCCCCTTCACTACAAGGGCTCCATCTTCCACCGCGTGATCCCCGACTTCATGTGCCAGGGCGGCGACTTCACCGCCGGGAACGGAACCGGCGGCGAGTCGATTTACGGCGCCAAGTTCGAGGACGAGAACTTCGTGAAGAAGCACACCGGGCCGGGAATCCTGTCCATGGCCAATGCCGGACCCGGAACAAACGGATCACAGTTCTTCATCTGCACGACCCAGACGTCGTGGCTGGACGGCAAGCACGTGGTGTTCGGTCAGGTGGTGGAAGGCCTGGATGTGGTGAGGGAGGTGGAGAAGGTGGGGTCAAGGTCCGGGAAGACCTCTAGGCCAGTGGTGATCGCCGACTGCGGTCAACTGTCTTAG	519	0.6185	MANPKVFFDITIGGQPAGRVVMELFADTTPKTAENFRALCTGEKGVGRSGKPLHYKGSIFHRVIPDFMCQGGDFTAGNGTGGESIYGAKFEDENFVKKHTGPGILSMANAGPGTNGSQFFICTTQTSWLDGKHVVFGQVVEGLDVVREVEKVGSRSGKTSRPVVIADCGQLS	172

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci11g0922	172	PIRSF	Peptidylpro_ismrse	1	172	IPR024936	GO:0003755
	Prci11g0922	172	CDD	cyclophilin_ABH_like	4	169	-	-
	Prci11g0922	172	Gene3D	-	1	172	IPR029000	-
	Prci11g0922	172	Pfam	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD	8	169	IPR002130	GO:0000413\|GO:0003755
	Prci11g0922	172	ProSitePatterns	Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature.	55	72	IPR020892	GO:0003755\|GO:0006457
	Prci11g0922	172	PRINTS	Cyclophilin peptidyl-prolyl cis-trans isomerase signature	60	72	IPR002130	GO:0000413\|GO:0003755
	Prci11g0922	172	PRINTS	Cyclophilin peptidyl-prolyl cis-trans isomerase signature	103	118	IPR002130	GO:0000413\|GO:0003755
	Prci11g0922	172	PRINTS	Cyclophilin peptidyl-prolyl cis-trans isomerase signature	24	39	IPR002130	GO:0000413\|GO:0003755
	Prci11g0922	172	PRINTS	Cyclophilin peptidyl-prolyl cis-trans isomerase signature	131	146	IPR002130	GO:0000413\|GO:0003755
	Prci11g0922	172	PRINTS	Cyclophilin peptidyl-prolyl cis-trans isomerase signature	118	130	IPR002130	GO:0000413\|GO:0003755

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci11g0922	Prci-Chr11	8464425	8465224	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci11g0922	18	152	U-box Gene Family	AT5G67530	47.794	4.91e-29	110

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci11g0922	K01802		-	pvy:116118183	325.479

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