Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0919 ATGGCGGCTTCTGTATCTGCCTGGTCTAAACCGGGAGCATGGGCGCTTGATTCCGAAGAACACGAAGCCGAGCTCCTTCAACAGAAAGACAAGGATGACACTTCCCAATTTCCTTCTCTTGCCGTCGCCGCTGCCACCAAGCCCAAGAAGAAGAAGGGCCAGACTATCCCCTTGGCTGATTTCACTACCTACGGAGGCCCTAAACCATCCCAGGCCTCTCATTCCGATGGCTTGACGCATGAAGACCTCATGTTGCTGCCAACCGGTCCTCGCCATCGAACCGCCGAGGAACTTGAGCGCGACCGGAGTCGACTTGGTGGTGGTTTTAGGTCTTATGGTTCCTATGACCGGCCCAATAGGAATTCTGGCGGGGACGAGTCGTTCAATTCTCGATGGGGTTCATCTAGGGTTTGTGATGAGCCCAGGAGGAATGGTTCCTTCGGTCGGGATTCGAATCGTGAAATGGCGCCTTCGCGAGCTGACGAAATAGATAATTGGACTGCTGCGAAGAAACCGATCGTTGGGAATGGTTTTGAGAGGAGAGAGAGGGATAGAGGAGGCTTTTTTGATTCACAATCGAGAGCTGATGAATCGGACAGTTGGGTAGCTAATAAGAATTATGTGCCATCGGAGGGGCGCAGATTTGGTTCGAATGGTGGTGGATTTGAGAGAGACAGGAAGGTTGGATTTGGTTCGAGCGGTGGTGCAGATTCGGATAATTGGAACAGGAAGAAAGGGGAATTTAACGGAGGAAGCGGCATTGACAGAATTGAGACCCCGAGTGGAAGACCTAGACTAAATTTGCAGCCTCGATCACTGCCTCTGAGTAATGGAAGCCAAGAAGGTTCTGGGAATTTGGCAAAGCCCAAGGGTCCAAACCCATTCGGAGACGCAAAGCCAAGGGAGGAGGTTTTGGCGGAGAAGGGGCAGGATTGGAAGAAGATTGACCAGCAGCTGGACGCAATGAAGATTAAGGAAACAGTCGAGAAGAACGATGGATTTGGGAGGAGGGGCTTTGGTTCTGGCGATGGACGTGCTAGTTTGCCCGAAGAAAGAGCTGAAAGGAGCTGGAGGAAGGCAGTATCTGATGACAGTCGTCCAACAAGCGCTGAGAAATCCGAGGATGGGCAAGTTGAAGAAAACTGA 1146 0.5175 MAASVSAWSKPGAWALDSEEHEAELLQQKDKDDTSQFPSLAVAAATKPKKKKGQTIPLADFTTYGGPKPSQASHSDGLTHEDLMLLPTGPRHRTAEELERDRSRLGGGFRSYGSYDRPNRNSGGDESFNSRWGSSRVCDEPRRNGSFGRDSNREMAPSRADEIDNWTAAKKPIVGNGFERRERDRGGFFDSQSRADESDSWVANKNYVPSEGRRFGSNGGGFERDRKVGFGSSGGADSDNWNRKKGEFNGGSGIDRIETPSGRPRLNLQPRSLPLSNGSQEGSGNLAKPKGPNPFGDAKPREEVLAEKGQDWKKIDQQLDAMKIKETVEKNDGFGRRGFGSGDGRASLPEERAERSWRKAVSDDSRPTSAEKSEDGQVEEN 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0919 381 MobiDBLite consensus disorder prediction 136 166 - -
Prci11g0919 381 MobiDBLite consensus disorder prediction 175 192 - -
Prci11g0919 381 Pfam Plant specific eukaryotic initiation factor 4B 7 324 IPR010433 GO:0003743
Prci11g0919 381 MobiDBLite consensus disorder prediction 270 286 - -
Prci11g0919 381 MobiDBLite consensus disorder prediction 295 313 - -
Prci11g0919 381 MobiDBLite consensus disorder prediction 326 381 - -
Prci11g0919 381 MobiDBLite consensus disorder prediction 21 313 - -
Prci11g0919 381 MobiDBLite consensus disorder prediction 115 134 - -
Prci11g0919 381 MobiDBLite consensus disorder prediction 347 375 - -
Prci11g0919 381 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 366 IPR010433 GO:0003743
Prci11g0919 381 MobiDBLite consensus disorder prediction 92 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0919 Prci-Chr11 8451671 8454130 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0919 1 362 Eukaryotic Initiation Factors Gene Family AT4G38710 52.618 3.90e-78 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0919 - - qsa:O6P43_011491 496.123