Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0914 ATGGCCTCTCCTGCTTCATTTTACGATGTGCTAGGGATTTCAATGGGGGCGAGCTGCCAAGAAATAAAGAGTGCGTACAGAAAGCTTGCAAGAACATATCACCCTGATGTGGTGGCTGTGAATCACAAGGCGAAATCAGCAAACGAGTTCATGAAGATTCACTCAGCCTATTCAACACTGTCAGACCCTGATAAGCGTGCTCAATATGACAGACAGCTTTGCAGGTACAGAATATCTCTTGAGTATTCATCTCTCCCTTCGCAGAATATGGATTCCATGTCAGGTTATCATCAAAGACGTGCTCAGGCTGGACATAAATGGGAGACAGATCAATTGAAGGCGGTGCTTCCCTGCTTTGAGATCTTTCAAGGTACCTGGGAATTGATTCACCACTCAGTGTAA 402 0.4527 MASPASFYDVLGISMGASCQEIKSAYRKLARTYHPDVVAVNHKAKSANEFMKIHSAYSTLSDPDKRAQYDRQLCRYRISLEYSSLPSQNMDSMSGYHQRRAQAGHKWETDQLKAVLPCFEIFQGTWELIHHSV 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0914 133 Gene3D DnaJ domain 1 106 IPR036869 -
Prci11g0914 133 SUPERFAMILY Chaperone J-domain 4 76 IPR036869 -
Prci11g0914 133 PRINTS DnaJ domain signature 45 65 IPR001623 -
Prci11g0914 133 PRINTS DnaJ domain signature 26 41 IPR001623 -
Prci11g0914 133 PRINTS DnaJ domain signature 8 26 IPR001623 -
Prci11g0914 133 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 3 100 - -
Prci11g0914 133 SMART dnaj_3 5 65 IPR001623 -
Prci11g0914 133 Pfam DnaJ domain 7 70 IPR001623 -
Prci11g0914 133 ProSiteProfiles dnaJ domain profile. 6 73 IPR001623 -
Prci11g0914 133 CDD DnaJ 7 62 IPR001623 -
Prci11g0914 133 ProSitePatterns Nt-dnaJ domain signature. 50 69 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0914 Prci-Chr11 8431056 8431550 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0914 8 70 C2H2 Transcription Factor Family AT1G74250 45.455 9.50e-10 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0914 - - pcin:129286061 276.174