Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0907 ATGGTTGGTTCTTTCGAAGAAGAGAGTGACAAAGCAATGCGGAAAGAGATGTCCTTTCTTGCCCAACCGCGATGCCTCCTTGTATTCCTTGTTCTTTCAGTTTTCCTGATTTTCGCCTTCTCTTATAACAAGCGGGTTGAGGAGAAACCAGAAGAGGAGCCTGAAATTACGCACAGAGTATTCTTGGATGTTGATATTGATGACCAACGCTTAGGTAGGATCATTATTGGACTCTATGGCCAAGTTGTACCAAAAACTGTGGAAAATTTCAGAGCTTTGTGCACAGGGGAGAAAGGCAAGAGTTCCAATGGCATAAAACTTCATTATAAAGGAACAGCATTTCATCGCATAATATCTGGCTTCGTGATTCAGGGTGGGGACATTGTTCATCAAGATGGCAGTGGATATGAATCTATTTATGGTGGCACCTTTCCTGATGAGAATTTTAAGATAAAACATTCACATGCTGGGGTTGTTGCTATGGTGAATTCTGGACCTGATTCCAATGGCTCACAGTTTTTTATCACCACTGTGAAGGCTAGCTGTTCATCTTCCACGACATCATAA 567 0.4198 MVGSFEEESDKAMRKEMSFLAQPRCLLVFLVLSVFLIFAFSYNKRVEEKPEEEPEITHRVFLDVDIDDQRLGRIIIGLYGQVVPKTVENFRALCTGEKGKSSNGIKLHYKGTAFHRIISGFVIQGGDIVHQDGSGYESIYGGTFPDENFKIKHSHAGVVAMVNSGPDSNGSQFFITTVKASCSSSTTS 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0907 188 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 64 180 IPR002130 GO:0000413|GO:0003755
Prci11g0907 188 SUPERFAMILY Cyclophilin-like 55 181 IPR029000 -
Prci11g0907 188 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 59 181 - -
Prci11g0907 188 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 109 126 IPR020892 GO:0003755|GO:0006457
Prci11g0907 188 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 61 188 IPR002130 GO:0000413|GO:0003755
Prci11g0907 188 FunFam Peptidyl-prolyl cis-trans isomerase CYP19-2 52 185 - -
Prci11g0907 188 Gene3D - 45 187 IPR029000 -
Prci11g0907 188 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 172 184 IPR002130 GO:0000413|GO:0003755
Prci11g0907 188 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 78 93 IPR002130 GO:0000413|GO:0003755
Prci11g0907 188 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 114 126 IPR002130 GO:0000413|GO:0003755
Prci11g0907 188 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 157 172 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0907 Prci-Chr11 8344895 8350143 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0907 72 175 U-box Gene Family AT5G67530 48.571 3.38e-21 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0907 - - vra:106760817 283.878