Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0906 ATGGTTGGTTCTTTCGAAGAAGAGAGTGACAAAGCAATGCGGAAAGAGATGTCCTTTCTTGCCCAACCGCGATGCCTCCTTGTATTCCTTGTTCTTTCAGTTTTCCTGATTTTCGCCTTCTCTTATAACAAGCGGGTTGAGGAGAAACCAGAAGAGGAGCCTGAAATTACGCACAGAGTATTCTTGGATGTTGATATTGATGACCAACGCTTAGGTAGGATCATTATTGGACTCTATGGCCAAGTTGTACCAAAAACTGTGGAAAATTTCAGAGCTTTGTGCACAGGGGAGAAAGGCAAGAGTTCCAATGGCATAAAACTTCATTATAAAGGAACAGCATTTCATCGCATAATATCTGGCTTCGTGATTCAGGGTGGGGACATTGTTCATCAAGATGGCAGTGGATATGAATCTATTTATGGTGGCACCTTTCCTGATGAGAATTTTAAGATAAAACATTCACATGCTGGGGTTGTTGCTATGGTGAATTCTGGACCTGATTCCAATGGCTCACAGTTTTTTATCACCACTGTGAAGGCTAGCTGCATGAAAACTTTGCAGGCTGGATGGAGAACACGTTGTATTTGGGAAGGTAGTAGAAGGTATGGATACTGTGTTTGCTATAGAAGGGGGAGCTGGAACCTACAGCGGTAA 654 0.4281 MVGSFEEESDKAMRKEMSFLAQPRCLLVFLVLSVFLIFAFSYNKRVEEKPEEEPEITHRVFLDVDIDDQRLGRIIIGLYGQVVPKTVENFRALCTGEKGKSSNGIKLHYKGTAFHRIISGFVIQGGDIVHQDGSGYESIYGGTFPDENFKIKHSHAGVVAMVNSGPDSNGSQFFITTVKASCMKTLQAGWRTRCIWEGSRRYGYCVCYRRGSWNLQR 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0906 217 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 61 217 IPR002130 GO:0000413|GO:0003755
Prci11g0906 217 SUPERFAMILY Cyclophilin-like 55 182 IPR029000 -
Prci11g0906 217 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 109 126 IPR020892 GO:0003755|GO:0006457
Prci11g0906 217 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 59 182 - -
Prci11g0906 217 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 114 126 IPR002130 GO:0000413|GO:0003755
Prci11g0906 217 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 172 184 IPR002130 GO:0000413|GO:0003755
Prci11g0906 217 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 157 172 IPR002130 GO:0000413|GO:0003755
Prci11g0906 217 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 78 93 IPR002130 GO:0000413|GO:0003755
Prci11g0906 217 FunFam Peptidyl-prolyl cis-trans isomerase CYP19-2 52 187 - -
Prci11g0906 217 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 64 183 IPR002130 GO:0000413|GO:0003755
Prci11g0906 217 Gene3D - 45 188 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0906 Prci-Chr11 8344458 8350143 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0906 72 175 U-box Gene Family AT5G67530 48.571 4.09e-20 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0906 - - qsa:O6P43_002110 283.878