Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0905 ATGGTTGGTTCTTTCGAAGAAGAGAGTGACAAAGCAATGCGGAAAGAGATGTCCTTTCTTGCCCAACCGCGATGCCTCCTTGTATTCCTTGTTCTTTCAGTTTTCCTGATTTTCGCCTTCTCTTATAACAAGCGGGTTGAGGAGAAACCAGAAGAGGAGCCTGAAATTACGCACAGAGTATTCTTGGATGTTGATATTGATGACCAACGCTTAGGTAGGATCATTATTGGACTCTATGGCCAAGTTGTACCAAAAACTGTGGAAAATTTCAGAGCTTTGTGCACAGGGGAGAAAGGCAAGAGTTCCAATGGCATAAAACTTCATTATAAAGGAACAGCATTTCATCGCATAATATCTGGCTTCGTGATTCAGGGTGGGGACATTGTTCATCAAGATGGCAGTGGATATGAATCTATTTATGGTGGCACCTTTCCTGATGAGAATTTTAAGATAAAACATTCACATGCTGGGGTTGTTGCTATGGTGAATTCTGGACCTGATTCCAATGGCTCACAGTTTTTTATCACCACTGTGAAGGCTAGCTGGCTGGATGGAGAACACGTTGTATTTGGGAAGGTAGTAGAAGGTATGGATACTGTGTTTGCTATAGAAGGGGGAGCTGGAACCTACAGCGGTAAACCCCGAAAGAAAGTAGTAATATCAGACACTGGAGAGATACCCCGGAGCCAGTGGGAGGAGCAAGGCTGA 708 0.4393 MVGSFEEESDKAMRKEMSFLAQPRCLLVFLVLSVFLIFAFSYNKRVEEKPEEEPEITHRVFLDVDIDDQRLGRIIIGLYGQVVPKTVENFRALCTGEKGKSSNGIKLHYKGTAFHRIISGFVIQGGDIVHQDGSGYESIYGGTFPDENFKIKHSHAGVVAMVNSGPDSNGSQFFITTVKASWLDGEHVVFGKVVEGMDTVFAIEGGAGTYSGKPRKKVVISDTGEIPRSQWEEQG 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0905 235 Gene3D - 45 232 IPR029000 -
Prci11g0905 235 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 61 225 IPR002130 GO:0000413|GO:0003755
Prci11g0905 235 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 64 224 IPR002130 GO:0000413|GO:0003755
Prci11g0905 235 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 59 226 - -
Prci11g0905 235 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 109 126 IPR020892 GO:0003755|GO:0006457
Prci11g0905 235 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 172 184 IPR002130 GO:0000413|GO:0003755
Prci11g0905 235 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 114 126 IPR002130 GO:0000413|GO:0003755
Prci11g0905 235 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 157 172 IPR002130 GO:0000413|GO:0003755
Prci11g0905 235 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 78 93 IPR002130 GO:0000413|GO:0003755
Prci11g0905 235 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 185 200 IPR002130 GO:0000413|GO:0003755
Prci11g0905 235 FunFam Peptidyl-prolyl cis-trans isomerase 46 232 - -
Prci11g0905 235 SUPERFAMILY Cyclophilin-like 55 226 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0905 Prci-Chr11 8344458 8350143 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0905 72 220 U-box Gene Family AT5G67530 44.000 1.53e-27 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0905 - - qsa:O6P43_002110 380.563