Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0896 ATGTCAAAGCACCAAGACGACCTCGATCTCGATCTCCTCCTTTCCCTTCAAGACAGAGTTTTGGAAACTCCTCCCACTTCTCCTTCACCCCATTCACCGGGTTACTTATCCGACGATGGCTCGCCTAGGCAAAGGGAGACGGCTGACATGTCAGTATTTATAAATGCTGTTCAGGATTGTCTTGAAGACGAAACCAAAGCAAATAAGAAACCTGAGAATTTGAATGGGCCGGTGTACAAGAAATCAAATCATACTGAGGTCGAGAAATTTTCTGGTCTGCGAATAAGGAACCAATTGGTAACCTCTTCAGAGCTCAGGGAACGCTTTTCAGACATTCGTTTCGTTCGGCTACCAGTAATCAAGAATTTGCTGATAGGGGATACTATTTCTGGATGTTGGGCGACGGTTGGAGTGCTGACAGAGAAAGGGAGCCCAAAGACAAGTTCAACAGGGAAGAGCTTCTGCATATGGAAAATAGGGTGTTTGGATGAAAGTAATATTTCTCTCTTCTTGTTCGGTGACGCTTATAAGAGGAACTCGCAAGAACATGCGGGGACGGTCTTTGCATTGTTTAACTGCGCAGTACGCAAGGATGCTATGGGCAATGCTTTTTCATTGAGTGCATATTCCCCAAGTCAAATTTTAAAAATAGGAACTTCTGTTGATTATGGAGTTTGCAAGGGAAAACGAAAGGATGGGATGCCTTGTACGCTGGTTATAAATATACGTCAAGGGATATATTGTAAATATCATAAATCGAAATCATCAAAAGAGTACTCCACAATGCGAACTGAACTGAAGGGAGGGAACTTAAAAACAGCATTTAGGCCAAGGGATTATCTCAAGTCAGAAGGAATTTACTTAGTTGATCCTGCTATTGGCAAAACAAACCCAACGAAACCTCAGCCCATGAAATTGCTGTCTGTGGATGCTCTTAAAAAGGCATTGAGCAATGCAGACAAAGTGACAACAAATAAGCATTCACAAGGGATAAGGTTTCTTTCTGAGGTCACAGGCAAGACGGACTCTAGGGCAGTAAAGAGAAGACAAGTGACGCCGAATGAGCAAAAAAAGTGCCTTGATAAGAGGAAATCGTCTTCAGGAAACGAGAGATCCCCTGCAACAAGAGACAGACATATAGATGCCAAAAGAATAAAAGCTGAAGAGCAAGCATCGGGTGATAAAACCACAAGGGGTAGTGGAAAGATGATTGAATTAGACTTTGTCAGTTCAGATGAGGATGTCTGA 1248 0.4279 MSKHQDDLDLDLLLSLQDRVLETPPTSPSPHSPGYLSDDGSPRQRETADMSVFINAVQDCLEDETKANKKPENLNGPVYKKSNHTEVEKFSGLRIRNQLVTSSELRERFSDIRFVRLPVIKNLLIGDTISGCWATVGVLTEKGSPKTSSTGKSFCIWKIGCLDESNISLFLFGDAYKRNSQEHAGTVFALFNCAVRKDAMGNAFSLSAYSPSQILKIGTSVDYGVCKGKRKDGMPCTLVINIRQGIYCKYHKSKSSKEYSTMRTELKGGNLKTAFRPRDYLKSEGIYLVDPAIGKTNPTKPQPMKLLSVDALKKALSNADKVTTNKHSQGIRFLSEVTGKTDSRAVKRRQVTPNEQKKCLDKRKSSSGNERSPATRDRHIDAKRIKAEEQASGDKTTRGSGKMIELDFVSSDEDV 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0896 415 MobiDBLite consensus disorder prediction 340 415 - -
Prci11g0896 415 MobiDBLite consensus disorder prediction 19 44 - -
Prci11g0896 415 MobiDBLite consensus disorder prediction 341 395 - -
Prci11g0896 415 Gene3D - 78 252 IPR012340 -
Prci11g0896 415 FunFam DNA replication licensing factor mcm10 79 253 - -
Prci11g0896 415 PANTHER PROTEIN MCM10 HOMOLOG 25 386 IPR040184 GO:0003690|GO:0003697|GO:0006270
Prci11g0896 415 Pfam Primase zinc finger 218 263 IPR015408 GO:0005634|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0896 Prci-Chr11 8256295 8259532 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0896 19 414 Core DNA Replication Machinery Family AT2G20980 53.980 4.76e-142 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0896 K10736 - qsa:O6P43_011458 517.694