Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0885 ATGTCCGAGCAAGTAACCGAAGAAGGCCGAACCCAGCAGCATGGCAAAGACTACGCAGACCCTCCTCCTGCTCCTCTCTTTGACCTCGCCGAGCTCAAGCTCTGGTCTTTTTACAGAGATCTCGTTGCCGAGTTCGTCGCCACCCTCCTCTTCCTCTACATCTCCGTCGCCACCGCCATTGGTCACAATAAACAATCCTCCCCGTGCGATGGCGTCAGCATTCTTGGCGTCGCTTGGGCCTTCGGAGGCATGATCTTCGTCCTTGTCTACTGCACCGCCGGCATCTCCGGTGGGCACATCAGCCCTGCGGTGACGTTCGGATTGTTCTTGGCTCGGAAAGTATCGCTGATTCGGGCTGTAGCTTACATGGCAGCGCAGTGCCTGGGAGCCATTTGCGGTGTGGGGTTAGTGAAGGCGATCATGAAGCATTCGTGCGAGTCGCTCGGTGGCGGAGCCAACTCTGTGTCCGCGGGCTACGGCGAGGGCACTGCCCTGGGTGCTGAGATTATCGGCACCTTTGTGCTTGTCTACACCGTCTTCTCCGCCACTGACCCCAAAAGAACTTCCCGTGACTCCCACGTTCCCGTTCTGGCTCCGCTGCCAATCGGGTTTGCTGTTTTCGTGGTTCATTTGGCCACCATTCCCGTCACCGGAACCGGCGTAAACCCAGCTAGGAGCTTCGGTGCTGCTGTTATTTACAACAACCGCGAAGTTTGGGACGACCATTGGATCTTCTGGGTCGGTCCGTTTGTGGGAGCAATGGCGGCTGCGGCGTACCACCAATGCATAGTGAGGGCGGCAGCTGTCAAGGCGCATGGATCATTGAGAAGCAAGCCCGCCAGCTAG 846 0.5804 MSEQVTEEGRTQQHGKDYADPPPAPLFDLAELKLWSFYRDLVAEFVATLLFLYISVATAIGHNKQSSPCDGVSILGVAWAFGGMIFVLVYCTAGISGGHISPAVTFGLFLARKVSLIRAVAYMAAQCLGAICGVGLVKAIMKHSCESLGGGANSVSAGYGEGTALGAEIIGTFVLVYTVFSATDPKRTSRDSHVPVLAPLPIGFAVFVVHLATIPVTGTGVNPARSFGAAVIYNNREVWDDHWIFWVGPFVGAMAAAAYHQCIVRAAAVKAHGSLRSKPAS 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0885 281 Gene3D Glycerol uptake facilitator protein. 24 281 IPR023271 -
Prci11g0885 281 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 7 268 IPR034294 -
Prci11g0885 281 Pfam Major intrinsic protein 32 260 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci11g0885 281 MobiDBLite consensus disorder prediction 1 22 - -
Prci11g0885 281 NCBIfam MIP family channel protein 43 259 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci11g0885 281 SUPERFAMILY Aquaporin-like 31 264 IPR023271 -
Prci11g0885 281 FunFam Probable aquaporin PIP1-2 24 279 - -
Prci11g0885 281 PRINTS Major intrinsic protein family signature 39 58 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci11g0885 281 PRINTS Major intrinsic protein family signature 167 185 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci11g0885 281 PRINTS Major intrinsic protein family signature 203 225 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci11g0885 281 PRINTS Major intrinsic protein family signature 118 137 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci11g0885 281 PRINTS Major intrinsic protein family signature 81 105 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci11g0885 281 PRINTS Major intrinsic protein family signature 243 263 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci11g0885 281 CDD MIP 39 261 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0885 Prci-Chr11 8219415 8220511 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0885 1 281 Major Intrinsic Protein MIP AT2G16850 79.715 2.37e-169 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0885 K09872 - thj:104804325 476.863