Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0862 ATGGATTCCCTCAAAAAATCTTTCAAATCCTATTATTCCTACAAACATCCCAGAAAGATCTCCGCGGGCGCGGACGCCGACTCCGGCCACGAACAGCTTCCCATTCTCCTCCATCAAGAGACTCCCCTCGATCATCGTCCTCCTCACCCTGCTGCTCCATCATCCATGACCTCCACCACTCCCCCACATCGCCCCGACGTCGTCGTCAAAATCGACCAAGGTGACTCCAGCGGCCCCGCAGTGCCGCAGGGTGGCAAGATTTGGAGAGAATCTAGCTATGACTTCTGGAACAATGGAGATGCGAGCAAGAGTGTCAGTGATGGGAGTGCTGCCGCTAGCACTGGTGGTAATGACGAGGATGGCTTTGATTTCCGCCATCGTGGGCACGGTTCCGAGGATCCTCCTTCCATGCTCATTGGTAAGTTCTTGCACAAACAGAAAGCGTCTGGTGACATGTCGCTGGATATGGATTTAGAAATGGAGGAGTTCCAACATGACGGCACATTGCCTCCGGTGGAAGAGTCTCCGCAGCTCAATCGCGTTTCCAAGGACCTCAAGGTCTCCTTTGAGGAACCCACTTCCAATGTTGTTGAGGCGGCGGGTGATACCGTTAGACGACGCTACAAGGACTCGCCGGGTTACACCGAAGTTCATAAACCGCCGCAGCGCGATCAACGTGGATCGCCGGGTGTCCCCCGAAGTGGTAATGCTGGTGCTGGAGATGGCGAGGTGGTAAGATGCACCTCCAACGCTTCTCTTGAAAGGAATCTTTCGTTGCATAAGAAATCTGCTTTGCTGAAGGTCAAAAATAAGTCGAGATTGTTGGACCCACCGGAGCAACCGGACCGAAAGTCTGGTAGGGTGGCTAAATCAGGGCAAATGCTATCGGGGATGTTAGGGAAGAAAGGGGAGGACGAGGAAGACGACCCATTTTTGGAAGAGGACGTGCCGGATGAGTTGAAACAGACCCATTTTAGCATATGGGTTCTGCTTGAGTGGTTGAGTTTGATTTTGTTTGTTGCTGCCTTAGCATGCACGCTGAGCATAGCAGTTTTGAGGAATAAGATTCTCTGGAAGCTCCGGTTATGGAAATGGGAGGTGATGATCCTGGTTCTAATTTGCGGTCGGTTGGTTTCTGATTGGGTAATTCGAATTTTGGTGTTCTTCATCGAAAGAAATTTCCTTTTGCGGAAGAGAGTCCTCTATTTTGTGTATGGCGTGAGGAAGGCAGTTCAAAATTGTTTATGGTTGGGATTTGTTTTGATTGCTTGGCATCTATTATTCGATAAGAAGGTTGAGAGGGAGACTAGAGGCAACAACGCCCTTCAATATGTCACCAAGGTCTTGGTCTGTTTCTTGGTGGGTACTCTGGTATGGCTGGCAAAAACTCTTGTGGTTAAGGTTATGGCTTCTTCCTTCTATACAAGCACATACTTTGATAGGATTCAGGAGTCTCTGTTTAATCAATTTGTGATTGAAACACTGTCGGGGCCACCTCTGGTCGAAATTCAGAAGTCCGAGGAAGAGGAACAAAAGCTTGCTGATGAGGTTCAGAAACTGGAGAATGCTGGGGTTAACATTCCCCCTGAGCTCAGGGCAACTGCCTTCTCCACAAACAAGAGTCCAAGGGCAGCTGCCTTCTCTAGAACTAAGAGTCCAAGGGTGACAAAAAGCGGAATGCTCCAGAAAAGCCCCCGTCTTATAAGTGGAAAGTTTTCTCGTCCACTCTCCCATAAGTCACATGATGGGATTACTATTGATCACCTGCATAAGCTGAACCCGAAAAATGTCTCTGCCTGGAACATGAAAAGGTTAATGAATATGGTCCGGCACGGCACTCTTTCTACACTGGATGAACAGATACTTGATTCAGCTCAAGATGATGAAAATGCGACACAGATTAGAAGTGAAAATGAGGCAAGAGCTGCGGCAAAGAAAATATTTCAGAATGTTGCCAGGCGGGGTTGCAGGTTCATTTTACTGGAGGATTTGATGCGTTTTATGCAGGAAGATGAAGCTGAGAAAACCCTGGATCTCTTTGAAGGAGCATCTGAGTCTGGGAAGATCAGTAAATCTGCCTTGAAGAACTGGGTGGTTAATGCCTTCAGAGAGAGGAGAGCGCTTGCTTTGACATTGACTGATACCAAAACCGCAGTGAACAAACTTCACCGAATACTCAATTTTATAGTTGGTATCATTATAATGGTTATTTGGCTGTTGATACTGGGAATTGCCACCACCAAATTTCTTCTCTTTGTGAGCTCACAGCTTGTCTTGGTTGCGTTTATATTTGGAAATACCTGCAAGACAGTATTCGAAGCCATTGTTTTCTTGTTTGTCATGCACCCATTCGATGTGGGAGATAGGTGTGAAATCGATGGGGTCCAGATGGTTGTGGAAGAAATGAATATACTGACAACCATATTTTTAAGATATGACAATCAAAAAATAATCATCCCCAACAGCGTCCTGGCTACCAAGGCCATACATAATTACTACCGGAGTCCTGACATGGGAGATGCTATTGATTTCTGCATACACGTGTCTACCCCAGCTGAAAAGATAGCACTCATGAAACAAAGAATACATAGCTTCATCGATAACAAGAAGGAGCACTGGTATCCTTCAGCTTTTATAGTCTTCAGGGATCTGGAACAATTAAACATGATAAGGATATCGATTTGGCCTACTCATAGAATGAACCACCAAGACATGGGAGAAAGGTTTGTCAGAAGATCCCTCCTGATTGAAGAGCTACTGAGGATTTTCCGGGAGTTTGACATCCAGTATCGTCTTCTTCCTCTTGACATTAACATTAGAAGCTTGCCTACCACTTCTGAACGGCTTCCACCTAGTTGGGCCACGATCACGAGTTAA 2877 0.4658 MDSLKKSFKSYYSYKHPRKISAGADADSGHEQLPILLHQETPLDHRPPHPAAPSSMTSTTPPHRPDVVVKIDQGDSSGPAVPQGGKIWRESSYDFWNNGDASKSVSDGSAAASTGGNDEDGFDFRHRGHGSEDPPSMLIGKFLHKQKASGDMSLDMDLEMEEFQHDGTLPPVEESPQLNRVSKDLKVSFEEPTSNVVEAAGDTVRRRYKDSPGYTEVHKPPQRDQRGSPGVPRSGNAGAGDGEVVRCTSNASLERNLSLHKKSALLKVKNKSRLLDPPEQPDRKSGRVAKSGQMLSGMLGKKGEDEEDDPFLEEDVPDELKQTHFSIWVLLEWLSLILFVAALACTLSIAVLRNKILWKLRLWKWEVMILVLICGRLVSDWVIRILVFFIERNFLLRKRVLYFVYGVRKAVQNCLWLGFVLIAWHLLFDKKVERETRGNNALQYVTKVLVCFLVGTLVWLAKTLVVKVMASSFYTSTYFDRIQESLFNQFVIETLSGPPLVEIQKSEEEEQKLADEVQKLENAGVNIPPELRATAFSTNKSPRAAAFSRTKSPRVTKSGMLQKSPRLISGKFSRPLSHKSHDGITIDHLHKLNPKNVSAWNMKRLMNMVRHGTLSTLDEQILDSAQDDENATQIRSENEARAAAKKIFQNVARRGCRFILLEDLMRFMQEDEAEKTLDLFEGASESGKISKSALKNWVVNAFRERRALALTLTDTKTAVNKLHRILNFIVGIIIMVIWLLILGIATTKFLLFVSSQLVLVAFIFGNTCKTVFEAIVFLFVMHPFDVGDRCEIDGVQMVVEEMNILTTIFLRYDNQKIIIPNSVLATKAIHNYYRSPDMGDAIDFCIHVSTPAEKIALMKQRIHSFIDNKKEHWYPSAFIVFRDLEQLNMIRISIWPTHRMNHQDMGERFVRRSLLIEELLRIFREFDIQYRLLPLDINIRSLPTTSERLPPSWATITS 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0862 958 MobiDBLite consensus disorder prediction 270 291 - -
Prci11g0862 958 Coils Coil 503 523 - -
Prci11g0862 958 Pfam Mechanosensitive ion channel 724 929 IPR006685 GO:0016020|GO:0055085
Prci11g0862 958 MobiDBLite consensus disorder prediction 202 223 - -
Prci11g0862 958 PIRSF Memb_At2g17000 50 958 IPR016688 -
Prci11g0862 958 MobiDBLite consensus disorder prediction 200 243 - -
Prci11g0862 958 SUPERFAMILY Sm-like ribonucleoproteins 773 832 IPR010920 -
Prci11g0862 958 MobiDBLite consensus disorder prediction 21 86 - -
Prci11g0862 958 Gene3D - 783 832 IPR023408 -
Prci11g0862 958 FunFam Predicted mechanosensitive ion channel 783 832 - -
Prci11g0862 958 MobiDBLite consensus disorder prediction 101 136 - -
Prci11g0862 958 MobiDBLite consensus disorder prediction 272 286 - -
Prci11g0862 958 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 45 953 IPR016688 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0862 Prci-Chr11 8015961 8020624 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0862 64 958 Mechanosensitive Ion Channel Family AT1G78610 57.158 0.0 959
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0862 K22048 - gmx:102665658 1300.42