Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0861 ATGGATTCCCTGAAAAAATCATTCAAATCCTATTATTCCTACAAATATCCCAGAAAGATCTCCGCGGACACGGACGTCGACTCCGGCCACGAACAGCTTCCCATTCTACTCCATCAAGAAACTCCCCTCGATCATTGTCCTCCTCACCCTGCTGCTCCATCATCCATGACCTCCACCACTCCCCAGCATTGCCCCGACGTCGTCGTCAAAATCGACCAAGGTGACTCCGGGGGCCCCGCAGTGCCGCAGGGTGGCAAGATTTGGAGAGAATCTAGCTATGACTTCTGGAACAATGGAGATGAGAGCAAGAGTGTCAGTGATGGGAGTGCTGCCGCTAGCACTTGTGGTAATGACGAGGATGGCTTTGATTTCCGCTATCGTGGCCACGGTTCCGAGGATCCTCCTTCCATGCTCATTGGTAAGTTCTTGCGCAAACAGAAAGCGTCTGGTGACATGTCGCTGGATATGGATTTAGAAATGGAGGAGTTCCAACATGACGGCACATTGCCTCCGGTGGAAGAGTCTCCGCAGCTCAATCGCGTTTCGAAGGACCTCAAGGTCTCGTTCGAGGAACCCACTTCCAATGTTGTTGAGGCGGCGGGTGATACCGTTAGACGACGCTACAAGGACTCGCCGGGTTACACCGAAGTTCATAAATCGCCGCAGCGCGATCAACATGGATTGCCGGGTTTCCCCCGAAGTGGTAATGCTGGTGCTGGAGATGGCGAGGTGGTAAGATGCACCTCCAACGCTTCTTTTGAAAGGAATCTTTCCTTGCAGAGGAAATCTGCTTTGCTGAAGGTCAGAAATAAGTCGAGATTGTTGGACCCGCCGGAGGAACCGGACCGAAAGTCTGGTAGGGTGGCAAAATCAGGGCAAATGCTATCGGGGATGTCAGGGAAGAAAGGGGAGGACGAGGAAGACGACCCATTTTTGGAAGAGGACGTGCCGGATGAGTGGAAACAGACCCATTTTAGTATATGGGTTCTGCTTGAGTGGTTGAGTTTGATTTTGTTTCTTGCTGCGTTAGCATGCACGCTGAGCATCGCAGTTTTGAGGAATAAGATTCTCTGGAAGCTCCGGTTATGGAAATGGGAGGTGATGATCCTGGTTCTAATTTGCGGTCGGTTGGTTTCTGATTGGGTAATTCGAATTTTGGTGTTCTTCATCGAAAGAAATTTCCTTTTGCGGAAGAGAGTACTCTATTTTGTGTATGGTGTGAGGAAGGCAGTTCAAAATTGTTTATGGTTGGGATTTGTTTTGATTGCTTGGCGTCTATTATTCGATAAGAAGGTCGAGAGGGAGACTAGAGGCAAGAACGCCCTTCAATATGTCACCAAGTTCTTGGTCTGTTTCTTGGTGGGTACTCTGGTATTGTTGGCAAAAACTCTTGTGGTTAAGGTTATGGCTTCTTCCTTCTATACAAGCACATACTTTGATAGGATTCAGGAGTCTCTGTTTAATCAATTTGTGATTGAAACACTGTCGGGGCCACCACTGGTCGAAATTCAGAAGTCAGAGGAAGAGGAACAAAAGCTTGCTGATGAGGTTCAGAAACTGGAGAATGCTGGGGTTAACATTCCCCCTGAGCTCAGGGCAACTGCCTTATCCACAACCAAGAGTCCAAGGGCAGCTGCCTTCTCTAGAACTAAGAGTCCAAGGGCGACAAAAAGCGGAATGCTCCAGAAAAGCCCCCGTCTAATAAGTGGAAAGTTTTCTCGTCCACTCTCCCATAAGTCACATGATGGGATTACTATTGATCACCTGCATAAGCTGAACCCGAAAAATGTCTCTGCCTGGAACATGAAAAGGTTAATGAATATGGTCCGGCACGGCACTCTTTCTACACTGGATGAACAGATACTTGATGATGAAAATGCGACACAGATTAGAAGTGAAAATGAGGCAAGAGCTGCGGCAAAGAAAATATTTCAGAATGTTGCCAGGCGGGGTTGCAGGTTCATTTTACTGGAGGATTTGATGCGTTTTATGCAGGAAGATGAGGCTGAGAAAACCATGGATCTCTTTGAAGGAGCATCTGAGTCTGGGAAGATCAGTAAATCTGCCTTGAAGAACTGGGTGGTTAATGCCTTCAGAGAGAGGAGAGCGCTTGCTTTGACATTGACTGATACCAAAACCGCAGTGAACAAACTTCACGGAATACTCAATTTTATAGTTGGCATCATTGTAATGGTTATTGGGCTGTTAATACTGGGAATTGCCACCACTAAATTTCTTCTCTTTGTGAGCTCACAGCTTGTCTTGGTTGCGTTTATATTTGGAAATACCTGCAAGACAGTATTCGAAGCCATTGTTTTCTTGTTTGTCATGCACCCGTTTGATGTGGGAGATAGGTGTGAAATCGATGGGGTCCAGGTGGTTGTGGAAGAATTGAATATACTGACAACCATATTTTTAAGATATGACAATCAAAAAATAATCATCCCCAACAGCGTCCTGGCTACCAAGGCCATACATAATTACTACCGGAGTCCTGACATGGGAGATGCTATTGATTTCTGCATACACGTGTCTACCCCAGCTGAAAAGATAGCACTCATGAAACAAAGAATAAATAGCTTCATCGATAACAAGAAGGAGCACTGGTATCCTTCAGCTTTTATAGTCTTCAGGGAGCTGGAACAATTAAACATGATAAGGATATCGATTTGGCCAACTCATAGAATGAACCACCAAGACATGGGAGAAAGGTTTGTCAGAAGATCCCTCCTGATTGAAGAGCTACTGAGGATATTCCGGGAGTTTGACATCCAGTATCGTCTTCTTCCTCTGGACATTAACATTAGAAGCATGCCTGCCACTTCTGAACGGCTTCCACCTAGTTGGGCCACGATCACGAGTTAA 2865 0.4639 MDSLKKSFKSYYSYKYPRKISADTDVDSGHEQLPILLHQETPLDHCPPHPAAPSSMTSTTPQHCPDVVVKIDQGDSGGPAVPQGGKIWRESSYDFWNNGDESKSVSDGSAAASTCGNDEDGFDFRYRGHGSEDPPSMLIGKFLRKQKASGDMSLDMDLEMEEFQHDGTLPPVEESPQLNRVSKDLKVSFEEPTSNVVEAAGDTVRRRYKDSPGYTEVHKSPQRDQHGLPGFPRSGNAGAGDGEVVRCTSNASFERNLSLQRKSALLKVRNKSRLLDPPEEPDRKSGRVAKSGQMLSGMSGKKGEDEEDDPFLEEDVPDEWKQTHFSIWVLLEWLSLILFLAALACTLSIAVLRNKILWKLRLWKWEVMILVLICGRLVSDWVIRILVFFIERNFLLRKRVLYFVYGVRKAVQNCLWLGFVLIAWRLLFDKKVERETRGKNALQYVTKFLVCFLVGTLVLLAKTLVVKVMASSFYTSTYFDRIQESLFNQFVIETLSGPPLVEIQKSEEEEQKLADEVQKLENAGVNIPPELRATALSTTKSPRAAAFSRTKSPRATKSGMLQKSPRLISGKFSRPLSHKSHDGITIDHLHKLNPKNVSAWNMKRLMNMVRHGTLSTLDEQILDDENATQIRSENEARAAAKKIFQNVARRGCRFILLEDLMRFMQEDEAEKTMDLFEGASESGKISKSALKNWVVNAFRERRALALTLTDTKTAVNKLHGILNFIVGIIVMVIGLLILGIATTKFLLFVSSQLVLVAFIFGNTCKTVFEAIVFLFVMHPFDVGDRCEIDGVQVVVEELNILTTIFLRYDNQKIIIPNSVLATKAIHNYYRSPDMGDAIDFCIHVSTPAEKIALMKQRINSFIDNKKEHWYPSAFIVFRELEQLNMIRISIWPTHRMNHQDMGERFVRRSLLIEELLRIFREFDIQYRLLPLDINIRSMPATSERLPPSWATITS 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0861 954 Gene3D - 779 828 IPR023408 -
Prci11g0861 954 PIRSF Memb_At2g17000 53 954 IPR016688 -
Prci11g0861 954 MobiDBLite consensus disorder prediction 272 287 - -
Prci11g0861 954 Coils Coil 503 523 - -
Prci11g0861 954 MobiDBLite consensus disorder prediction 204 223 - -
Prci11g0861 954 MobiDBLite consensus disorder prediction 270 312 - -
Prci11g0861 954 Pfam Mechanosensitive ion channel 720 925 IPR006685 GO:0016020|GO:0055085
Prci11g0861 954 FunFam Predicted mechanosensitive ion channel 779 828 - -
Prci11g0861 954 SUPERFAMILY Sm-like ribonucleoproteins 769 828 IPR010920 -
Prci11g0861 954 MobiDBLite consensus disorder prediction 538 561 - -
Prci11g0861 954 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 50 949 IPR016688 -
Prci11g0861 954 MobiDBLite consensus disorder prediction 204 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0861 Prci-Chr11 7990972 7995444 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0861 66 954 Mechanosensitive Ion Channel Family AT1G78610 56.413 0.0 932
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0861 K22048 - gmx:100789882 1233.01