Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0857 ATGGCGATGGAGGATAACGAGAGCCGAGCGAGCGGAGTGCAGGAAACGTCGTCGCCACCCGCTCAAAACCGGCAGCAGAGACAGAAACTTGAAGTGTACAATGAGGTTCTTCGTCGCCTCAAGGATTCCAACAACGAAGAGGCTGTGCAGCCCGGCTTCCATCACCAGCTCTGGGCTCATTTCAACCGCCTTCCTACCCGGTATGCGTTCGATGTGAATGTGGAAAGGGCTGCGGATGTTCTGATGCACAAGAGACTACTGCATTTGGCACATGATCCTGCTAATAGGCCTGCAATTGAAGTTCGCCTGGTCCAGGTTCAACCGATATCTGATGGAAACTCAGCTGACTCTGTCCGTTCAGAAGCTCCTGGTAAAGAAACTGGTCAATTCTCTTCAAAGCACTCTGGGAGGCAGAGCATACATCCACCTCCTGCTTTTGGTTCTTCTCCAAATCTTGAAGCCCTGGCGCTTGAAGCAACCAAGTATGAAGATCTAGAGGTGGAACACTCTGTACACGCTGGAGAACAATATTCACGGCCCATGCATGAAATCACCTTCTCAACAGAAGACAAGCCAAAGCTTCTCAGTCAGTTAACTTCTTTGCTTTCTGAGATTGGACTGAACATTCAAGAGGCACACGTTTTTTCAACAACAGATGGCTACTCATTAGATGTGTTTGTTGTTGATGGATGGCCGTATGAGGAAACAGAACAGCTTAAAGCAGTTTTGGAGAAAGAAGTTTTGTTGATTGAGAGGCAGGCATGGCCCATTCAGCAACCAGTATCTTATGTTGGTGAGCCTGATCAAGGCGGGAAATGTGAACCTGATCATTTGACAATACCTAATGATGGGACAGATGTTTGGGAAATAGATCCTAAGCATTTGAAATTTGGAAGTAAAATTGCATCTGGATCATATGGTGATCTATTTAAAGGTACATATTGTAGTCAGGAAGTGGCGATTAAAGTTCTCAAAGCTGAGCATATAAATTCAGATTTACAAAGGGAGTTTGCCCAGGAAGTCTATATCATGAGAAAGGTTCGGCATAAGAATGTTGTGCAATTTATAGGAGCATGTACCAAGCCCCCATATTTGTGCATAGTAACAGAATTTATGTCCGGTGGAAGCGTGTATGACTACTTACATAAGCAAAAGGGTGTTTTTAAATTCCCATCCCTGCTCAAAGTAGCAATTGATGTTTCTAAGGGAATGAATTACTTGCACGAAAATAACATTATCCACAGAGACCTGAAGGCTGCGAATCTTTTGATGGATGAAAATTGTGTGGTTAAGGTTGCTGATTTTGGGGTTGCTAGAGTGAAAGCTCAATCTGGAGTTATGACAGCAGAAACTGGAACATATCGATGGATGGCTCCTGAGGTTATAGAACACAGGCCATATGATCACAAGGCAGATATATTTAGTTTTGGAGTTGTTTTATGGGAGTTGCTAACGGGAAAGCTTCCGTATGAGAATTTGACCCCACTACAGGCAGCTATAGGAGTGGTTCAGAAGGGTCTACGACCCACCATCCCCAAGAATGCCCATCCAAAATTTGTTGAGCTTCTTGAGAGATGTTGGCAGCAAGATCCAACTCTAAGACCTGATTTCTCTGAAAGTATAGACATTCTGCAACAGTTGGTTAAAGAGGTTGGAGATGGAGAGGATCCACGCAAGGAAAAATCTGGAGGAATTTTCTCTGTCCTCAGACGAGGTCATCACTGA 1725 0.4441 MAMEDNESRASGVQETSSPPAQNRQQRQKLEVYNEVLRRLKDSNNEEAVQPGFHHQLWAHFNRLPTRYAFDVNVERAADVLMHKRLLHLAHDPANRPAIEVRLVQVQPISDGNSADSVRSEAPGKETGQFSSKHSGRQSIHPPPAFGSSPNLEALALEATKYEDLEVEHSVHAGEQYSRPMHEITFSTEDKPKLLSQLTSLLSEIGLNIQEAHVFSTTDGYSLDVFVVDGWPYEETEQLKAVLEKEVLLIERQAWPIQQPVSYVGEPDQGGKCEPDHLTIPNDGTDVWEIDPKHLKFGSKIASGSYGDLFKGTYCSQEVAIKVLKAEHINSDLQREFAQEVYIMRKVRHKNVVQFIGACTKPPYLCIVTEFMSGGSVYDYLHKQKGVFKFPSLLKVAIDVSKGMNYLHENNIIHRDLKAANLLMDENCVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHRPYDHKADIFSFGVVLWELLTGKLPYENLTPLQAAIGVVQKGLRPTIPKNAHPKFVELLERCWQQDPTLRPDFSESIDILQQLVKEVGDGEDPRKEKSGGIFSVLRRGHH 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0857 574 SMART serkin_6 295 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g0857 574 Coils Coil 23 43 - -
Prci11g0857 574 Gene3D Transferase(Phosphotransferase) domain 1 374 562 - -
Prci11g0857 574 MobiDBLite consensus disorder prediction 124 145 - -
Prci11g0857 574 FunFam Serine/threonine-protein kinase isoform 1 285 373 - -
Prci11g0857 574 SUPERFAMILY Protein kinase-like (PK-like) 284 540 IPR011009 -
Prci11g0857 574 MobiDBLite consensus disorder prediction 552 574 - -
Prci11g0857 574 Coils Coil 233 253 - -
Prci11g0857 574 MobiDBLite consensus disorder prediction 111 148 - -
Prci11g0857 574 SUPERFAMILY ACT-like 181 245 IPR045865 -
Prci11g0857 574 MobiDBLite consensus disorder prediction 1 29 - -
Prci11g0857 574 MobiDBLite consensus disorder prediction 552 567 - -
Prci11g0857 574 ProSitePatterns Serine/Threonine protein kinases active-site signature. 412 424 IPR008271 GO:0004672|GO:0006468
Prci11g0857 574 ProSiteProfiles Protein kinase domain profile. 295 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g0857 574 MobiDBLite consensus disorder prediction 9 29 - -
Prci11g0857 574 Pfam Protein tyrosine and serine/threonine kinase 295 541 IPR001245 GO:0004672|GO:0006468
Prci11g0857 574 PRINTS Tyrosine kinase catalytic domain signature 452 462 IPR001245 GO:0004672|GO:0006468
Prci11g0857 574 PRINTS Tyrosine kinase catalytic domain signature 369 382 IPR001245 GO:0004672|GO:0006468
Prci11g0857 574 PRINTS Tyrosine kinase catalytic domain signature 471 493 IPR001245 GO:0004672|GO:0006468
Prci11g0857 574 PRINTS Tyrosine kinase catalytic domain signature 515 537 IPR001245 GO:0004672|GO:0006468
Prci11g0857 574 PRINTS Tyrosine kinase catalytic domain signature 406 424 IPR001245 GO:0004672|GO:0006468
Prci11g0857 574 CDD STKc_MAP3K-like 301 544 - -
Prci11g0857 574 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 133 549 - -
Prci11g0857 574 Gene3D Phosphorylase Kinase; domain 1 285 373 - -
Prci11g0857 574 ProSiteProfiles ACT domain profile. 183 266 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0857 Prci-Chr11 7973157 7981746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0857 8 573 MAP Kinase Kinase Kinase AT4G35780 64.841 0.0 734
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Prci11g0857 PK_Tyr_Ser-Thr 4.4e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0857 - - gmx:100805180 956.051