Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0833 ATGGGTTGCTGCCCATCTTCACTTCTGACCGAGACTCACCCAGAAAAGCAGCAAAATCAACAACCCCCTTACCATGTTCACACTCACAACCACATCCATACCCAACCACACCCGCCACCTTCTCTGACCGCCGACCCATCCGCCGCCGGCGTTCCTTCTTTCTCCGAGTTCTCTTTCGCCGACCTCAAAGCAGCCACCAATAATTTTAGCTCCGAATTTATTGTGTCTGAGAGTGGAGAGAAGGCACCTAACCTTGTATATAAAGGTCGCCTCCCCAACCGCCGCTGGATTGCCGTCAAGAAGTTCACCAAGGCTGCATGGCCCGATCCCAAGCAATTTGTGGAAGAGGCGTCAGGTGTTGGAAAATTGCGACATCGCAGGCTTGCTAATTTGATTGGCTACTGCTGTGATGGAGATGAGAGACTACTTGTTGCAGAATACATGCCCAATGACACTCTCGCTAAGCATCTTTTCCACTGGGAAAATCAGACCATTGAGTGGGCCATGCGCTTAAGAGTGGGTCTTTCCATTGCAGAAACTTTAAATTACTGTAGTTCCGAGGGTCGCCCATTATACCATGATTTGAATGCTTATAGGGTTCTATTTGATGAGGAAGGTGATCCTCGTCTATCATGCTTTGGTTTGATGAAGAACAGTAGGGATGGAAAAAGTTATAGCACGAATCTTGCTTACACACCTCCTGAGTACTTAAGAAATGGAAGGGTCACTCCTGAAAGTGTCATTTACAGCTTTGGTACTGTTCTCCTAGACTTGCTAAGTGGAAAACACATCCCTCCAAGTCATTTGCAGGCACTTGACATGATACAGGGGAAAGCCAACATGCTTCTCATGGATTCACATTTAGAGGGAAAGTTCTCTAAAGAAGAGGCAGCAGTAGTTGTCAATCTGGCCTCTAAATGTTTGCAATATGAGCCGAGGGAGCGGCCTGATACAAAGGAATTAGTCACAACACTTGCTCCATTGCAAACAAAACCTGATGTACCTTCTTATATTCTGCTTGGAATTCCAAAGCATGAGGAAGCTCCATCAACCCCACAACGCCCTCTTTCAGCCATGGGTGAGGCTTGTTCAAGGATGGACCTCACTGCAATACATCAGATCTTGGTTGCAACACACTACAGAGATGATGAAGGGACTAATGAGTTGTCTTTCCAAGAATGGACCCAACAGATGAGGGATATGTTGGAAGCAAGGAAGCGTGGAGACTATGCATTCCGTGACAAAGATTTCAAGACAGCAATTGAAAATTATTCACAGTTTATTGATGTTGGAACAATGGTGTCACCAACGGTTTTTGCTCGGCGCAGTCTATGCTACCTGTTATGCGATCAACCAGATCCTGCGCTGAGAGATGCAATGCAAGCGCAATGTGTTTATCCAGACTGGCCTGTAGCATTCTACATGCAATCAGTTGCTCTAGCGAAGCTGGACATGCAAAAGGACGCTGCTGATATGTTGAATGAGGCTGCTGCTTTGGAAGAAAAGAGGCAAAGAGGAGGCAGAGGCGCATAG 1533 0.4664 MGCCPSSLLTETHPEKQQNQQPPYHVHTHNHIHTQPHPPPSLTADPSAAGVPSFSEFSFADLKAATNNFSSEFIVSESGEKAPNLVYKGRLPNRRWIAVKKFTKAAWPDPKQFVEEASGVGKLRHRRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVGLSIAETLNYCSSEGRPLYHDLNAYRVLFDEEGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIYSFGTVLLDLLSGKHIPPSHLQALDMIQGKANMLLMDSHLEGKFSKEEAAVVVNLASKCLQYEPRERPDTKELVTTLAPLQTKPDVPSYILLGIPKHEEAPSTPQRPLSAMGEACSRMDLTAIHQILVATHYRDDEGTNELSFQEWTQQMRDMLEARKRGDYAFRDKDFKTAIENYSQFIDVGTMVSPTVFARRSLCYLLCDQPDPALRDAMQAQCVYPDWPVAFYMQSVALAKLDMQKDAADMLNEAAALEEKRQRGGRGA 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0833 510 ProSiteProfiles Protein kinase domain profile. 72 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g0833 510 SUPERFAMILY Protein kinase-like (PK-like) 51 334 IPR011009 -
Prci11g0833 510 MobiDBLite consensus disorder prediction 1 49 - -
Prci11g0833 510 SUPERFAMILY TPR-like 404 501 IPR011990 GO:0005515
Prci11g0833 510 Coils Coil 482 502 - -
Prci11g0833 510 Gene3D Phosphorylase Kinase; domain 1 46 147 - -
Prci11g0833 510 FunFam probable serine/threonine-protein kinase At4g35230 399 508 - -
Prci11g0833 510 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 34 505 IPR045845 GO:0004672|GO:0009742
Prci11g0833 510 Gene3D Transferase(Phosphotransferase) domain 1 149 340 - -
Prci11g0833 510 FunFam probable serine/threonine-protein kinase At4g35230 45 147 - -
Prci11g0833 510 FunFam probable serine/threonine-protein kinase At5g41260 149 342 - -
Prci11g0833 510 Pfam Protein tyrosine and serine/threonine kinase 87 325 IPR001245 GO:0004672|GO:0006468
Prci11g0833 510 Gene3D Tetratricopeptide repeat domain 399 507 IPR011990 GO:0005515
Prci11g0833 510 MobiDBLite consensus disorder prediction 10 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0833 Prci-Chr11 7872765 7879820 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0833 57 337 Glycoside Hydrolase AT3G07070 36.102 7.96e-45 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Prci11g0833 PK_Tyr_Ser-Thr 9.5e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0833 K14500 - zju:125424183 896.73