Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0822 ATGGGGATTTGCTGGGGTTCTCCAGTTGACAACCCAAGCACCGCCAGCACATCTGATCACCTTAGTGCAGCTACAACGGGAACATCCCGGACTACTAGCAATACTACGACTGCTACTACATCTTATGGGAGTGGAAGCATCTCCATAAATAGCCAGTTTTCCGAGTCCATTGGCGGTGAAGCTTCTCCAAATGGGCAGATTTTGCCTACTGCAAATTTAAGGATATTCTCTTTTGCGGAATTGAAGGCTGCAACTAAGAATTTTAGAGTTGATACAGTACTTGGAGAGGGAGGTTTTGGAAAAGTCTTCAAGGGTTGGCTTGAAGAAAAGGCAACGCCAAAAAGTGGAAGTGGAACGGTCGTTGCCGTTAAAAAATTGAACTCAGAGAGCTTACAAGGATTTGAGGAATGGCAGTCGGAAATAAATTTTCTAGGACGGCTTTCTCATCCTAACCTCGTTAAGCTGTTAGGATACTGTTGGGAAGAAAATGAGCTTCTTCTCGTTTATGAATTCATGCAAAAGGGCAGTTTGGAAAATCATCTATTTGGAAGGGGTTCTGCTGTTCAACCACTTCCATGGGAAATTAGGCTTAAGATTGCAATTGGAGCAGCTCGTGGCTTGGCATTCTTACACACATCTGAGAAAGTAATTTACCGTGATTTCAAGGCCTCCAATATATTGCTCGATGGGTCTTATACTGCTAAGATTTCAGACTTTGGTTTGGCAAAATTGGCACCTTCAGCTAGTCGGTCCCATGTAACAACAAGGGTGATGGGCACATTTGGCTATGCAGCTCCTGAGTATGTGGCAACAGGGCATCTATACGTGAAGAGTGACGTGTATGGATTTGGAGTTGTTTTGGTTGAGATACTGACAGCCCTTCGAGCACTGGATCAAAATCGACCTAGTGGCCAACATAATCTTGTGGATTGGGTGAAACCATACTTACAAGATGGAAGAAAATTGAAGGGCATAATGGATTCACGATTAGAGGGAAAGTATTCATCCAAATCTGCATTTCGTATAGCTCAACTTGCTTTAAAATGTCTTGCATTAGAGCCTAAACATCGGCCATCAATGAAGGAAGTCCTAGAGAACTTAGAGCGGATTCAAGCTGCTAACGATAGGTCTGTGGAGCCGAGACCTCGTTCTACCCGTAGTATGGCTCCTCATCATGCTTCTCGACCCTTGCGCCCTCAATCTCACTAA 1209 0.4417 MGICWGSPVDNPSTASTSDHLSAATTGTSRTTSNTTTATTSYGSGSISINSQFSESIGGEASPNGQILPTANLRIFSFAELKAATKNFRVDTVLGEGGFGKVFKGWLEEKATPKSGSGTVVAVKKLNSESLQGFEEWQSEINFLGRLSHPNLVKLLGYCWEENELLLVYEFMQKGSLENHLFGRGSAVQPLPWEIRLKIAIGAARGLAFLHTSEKVIYRDFKASNILLDGSYTAKISDFGLAKLAPSASRSHVTTRVMGTFGYAAPEYVATGHLYVKSDVYGFGVVLVEILTALRALDQNRPSGQHNLVDWVKPYLQDGRKLKGIMDSRLEGKYSSKSAFRIAQLALKCLALEPKHRPSMKEVLENLERIQAANDRSVEPRPRSTRSMAPHHASRPLRPQSH 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0822 402 ProSitePatterns Protein kinases ATP-binding region signature. 94 125 IPR017441 GO:0005524
Prci11g0822 402 ProSiteProfiles Protein kinase domain profile. 88 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g0822 402 MobiDBLite consensus disorder prediction 371 386 - -
Prci11g0822 402 MobiDBLite consensus disorder prediction 371 402 - -
Prci11g0822 402 MobiDBLite consensus disorder prediction 1 41 - -
Prci11g0822 402 CDD STKc_IRAK 94 370 - -
Prci11g0822 402 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 172 379 - -
Prci11g0822 402 Gene3D Phosphorylase Kinase; domain 1 72 171 - -
Prci11g0822 402 Gene3D Transferase(Phosphotransferase) domain 1 172 389 - -
Prci11g0822 402 ProSitePatterns Serine/Threonine protein kinases active-site signature. 216 228 IPR008271 GO:0004672|GO:0006468
Prci11g0822 402 MobiDBLite consensus disorder prediction 9 41 - -
Prci11g0822 402 Pfam Protein tyrosine and serine/threonine kinase 90 367 IPR001245 GO:0004672|GO:0006468
Prci11g0822 402 PANTHER OS01G0588500 PROTEIN-RELATED 34 371 - -
Prci11g0822 402 SUPERFAMILY Protein kinase-like (PK-like) 66 369 IPR011009 -
Prci11g0822 402 FunFam Serine/threonine-protein kinase BIK1 55 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0822 Prci-Chr11 7715033 7719339 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0822 71 371 Receptor kinase-like Gene Family AT4G02010 51.475 2.15e-100 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Prci11g0822 PK_Tyr_Ser-Thr 9.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0822 - - gmx:100305417 619.002