Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0813 ATGGGCAACTCATGCCGCGGATCTTTGAAAGGGAAACATTTTCAGGGCTTCAGCCAGCCCGAAGACCATTCCACTGCCCATTCCAAGCGCAACATTTCTTCTGATTGCTCCAACCCAGATTATTACGCCTCCAGCTTGAACTCCCAGAAACGCGTAGCCAAAGAAAACCCAAATAAAGATATTAGTAACGACTCTTGTACAGATCAATACAGCAATAGCAGTAACCTACCCTTCCTTATTCCACCCAAGAAAGACGCTATCATGAGGCGGGGGGTTGATAACCAAGCATATTATGTATTGGGTCATAAGACTCCCAATATCCGTGATCTTTATACTCTAGGCCGTAAATTAGGGCAGGGACAATTTGGCACCACTTATTTATGCACTGAGAATTCCTCTGGCACTGAATATGCATGTAAGTCCATCTCTAAGAGGAAGTTGATCTCTAAGGAAGATGTCGAGGATGTTAGGAGGGAAATTCAGATAATGCACCATTTAGCAGGTCACAAGAATATTGTTACAATAAAGGGTGCTTATGAGGATCCATTGTATGTGCATATTGTCATGGAGCTATGTTCTGGGGGAGAGTTGTTTGATCGCATTATCCAGAGGGGCCACTACAGTGAAAGAAAGGCTGCAGAATTGACCAAAATTATTGTAGGAGTAGTTGAGGCATGTCATTCCCTTGGTGTTATGCATAGAGATCTCAAGCCTGAAAACTTTTTATTGGTCAACAAAGATGATGATTTCTCACTTAAAGCTATTGACTTTGGGCTTTCCGTTTTCTTCAAACCTGGTCAAATTTTCACTGACGTAGTTGGCAGCCCATATTATGTTGCTCCTGAGGTTCTCCTCAAGCATTATGGGCCAGAAGCCGATGTATGGACAGCAGGTGTCATACTGTACATATTGCTTAGTGGTGTGCCACCATTTTGGGCAGGTCATCCCTGGATATGTGAAAATGGAGTTGCCCCTGATAGGGCACTGGATCCTGCTGTCCTTTCTCGTCTCAAACAGTTCTCTGCGATGAATAAGTTAAAGAAAATGGCTTTGAGGGTAATTGCTGAAAGTCTATCCGAAGAGGAGATTGCAGGTCTAAAAGAAATGTTTAAGGCCATGGATACTGACAACAGTGGCGCAATCACTTTTGATGAACTCAAGGCTGGTTTGAGAAGATATGGATCAACCCTCAAGGATACAGAAATTCGTGATCTTATGGAAGCGGCTGATGTAGACAACAGTGGAACTATAGACTATGGAGAGTTTGTTGCTGCTACAGTTCATCTAAACAAATTAGAGCGTGAGGAGCATCTAGTTGCAGCCTTCCAATATTTTGACAAGGATGGAAGTGGTTATATTACAGTTGATGAGCTTCAACAAGCTTGTATAGAACATAACATGACCGATGTCTTTCTTGAAGATATTATTAGAGAAGTGGATCAAGATAATGATGGAAGGATTGATTATGGTGAATTTGTTGCCATGATGCAAAAGGGCAACGCTGGAGTTGGAAGAAGGACTATGCGTAACAGTCTCAATTTGAGCATGAGAGATGCACCAGAATTTAGATTAGAAAGAGAGGGAAAAAGAGAAAGGAAACAGAGACAAAGAGCAAATCTGAATATGCAATTCTTATCAGAAATCAAGGTCAGAAATTAG 1659 0.4189 MGNSCRGSLKGKHFQGFSQPEDHSTAHSKRNISSDCSNPDYYASSLNSQKRVAKENPNKDISNDSCTDQYSNSSNLPFLIPPKKDAIMRRGVDNQAYYVLGHKTPNIRDLYTLGRKLGQGQFGTTYLCTENSSGTEYACKSISKRKLISKEDVEDVRREIQIMHHLAGHKNIVTIKGAYEDPLYVHIVMELCSGGELFDRIIQRGHYSERKAAELTKIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAGHPWICENGVAPDRALDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMEAADVDNSGTIDYGEFVAATVHLNKLEREEHLVAAFQYFDKDGSGYITVDELQQACIEHNMTDVFLEDIIREVDQDNDGRIDYGEFVAMMQKGNAGVGRRTMRNSLNLSMRDAPEFRLEREGKRERKQRQRANLNMQFLSEIKVRN 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0813 552 ProSitePatterns EF-hand calcium-binding domain. 410 422 IPR018247 -
Prci11g0813 552 FunFam Calcium-dependent protein kinase 1 113 196 - -
Prci11g0813 552 Gene3D Transferase(Phosphotransferase) domain 1 197 323 - -
Prci11g0813 552 ProSiteProfiles EF-hand calcium-binding domain profile. 472 502 IPR002048 GO:0005509
Prci11g0813 552 ProSitePatterns Serine/Threonine protein kinases active-site signature. 231 243 IPR008271 GO:0004672|GO:0006468
Prci11g0813 552 Gene3D Phosphorylase Kinase; domain 1 113 196 - -
Prci11g0813 552 SUPERFAMILY EF-hand 342 499 IPR011992 -
Prci11g0813 552 SMART efh_1 471 499 IPR002048 GO:0005509
Prci11g0813 552 SMART efh_1 401 429 IPR002048 GO:0005509
Prci11g0813 552 SMART efh_1 365 393 IPR002048 GO:0005509
Prci11g0813 552 SMART efh_1 437 465 IPR002048 GO:0005509
Prci11g0813 552 ProSitePatterns Protein kinases ATP-binding region signature. 117 140 IPR017441 GO:0005524
Prci11g0813 552 MobiDBLite consensus disorder prediction 30 52 - -
Prci11g0813 552 Gene3D - 326 500 - -
Prci11g0813 552 ProSiteProfiles EF-hand calcium-binding domain profile. 397 432 IPR002048 GO:0005509
Prci11g0813 552 ProSiteProfiles EF-hand calcium-binding domain profile. 433 468 IPR002048 GO:0005509
Prci11g0813 552 Pfam Protein kinase domain 111 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g0813 552 SUPERFAMILY Protein kinase-like (PK-like) 111 318 IPR011009 -
Prci11g0813 552 CDD STKc_CAMK 111 313 - -
Prci11g0813 552 MobiDBLite consensus disorder prediction 1 69 - -
Prci11g0813 552 Pfam EF-hand domain pair 436 497 IPR002048 GO:0005509
Prci11g0813 552 Pfam EF-hand domain pair 366 426 IPR002048 GO:0005509
Prci11g0813 552 ProSiteProfiles EF-hand calcium-binding domain profile. 361 396 IPR002048 GO:0005509
Prci11g0813 552 PANTHER SERINE/THREONINE-PROTEIN KINASE 103 312 - -
Prci11g0813 552 SMART serkin_6 111 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g0813 552 ProSitePatterns EF-hand calcium-binding domain. 446 458 IPR018247 -
Prci11g0813 552 ProSitePatterns EF-hand calcium-binding domain. 374 386 IPR018247 -
Prci11g0813 552 ProSiteProfiles Protein kinase domain profile. 111 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g0813 552 FunFam Calcium-dependent protein kinase 1 326 500 - -
Prci11g0813 552 ProSitePatterns EF-hand calcium-binding domain. 480 492 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0813 Prci-Chr11 7665366 7675642 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0813 1 519 EF-hand Containing Proteins AT2G17290 74.956 0.0 850
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Prci11g0813 Pkinase 4e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0813 K13412 - qsa:O6P43_002195 917.146