Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0808 ATGGATAACGAAATTCTTGAATTTGACATTGGGTTGGGAGGAGGAGATGGCCTAGGGGATGATGATGGGGGCGACATGGAGCAACCCGTTGATGAGGACGATTTGGCCTATAGCCCCGCTCCTAGCAGTGGTGGTGGAGGTGCGATTGGTAGTGGTGAGATATATCTTCCTGAGGGTGACCTCTCGGATCTTGAACCTTACGAGGGCATGGAATTCGAGTCTGAGGAGGCCGCGAAGGCCTTCTATAACTCCTATGCGCGTCGTGTCGGATTCAGTACCCGTGTCAGTTCATCCCGCCGTTCCAGGCGTGATGGAGCAATTATACAGAGACAGTTTGTCTGCGCAAAGGAGGGCTTCCGCAATTTGAATGAGAAACGCACCAAGGATAGAGAGATTAAGCGCCCTCGAACCATCACCAGAGTGGGATGCAAAGCGTCCTTGTCAGTGAAAATGCACGACTCTGGCAAGTGGATCGTTTCGGGGTTTGTTAGAGAACATAACCACGAACTCGTTCCACCCGATCAGGTGCATTGTCTTCGTTCTCACAGACAAATATCAGGAGCTGCTAAGACTCTCATTGACACCTTACAGGCTGCTGGAATGGGTCCTCGTAGAATCATGTCAGCTCTCATTAAAGAGTATGGAGGGATTAGCAACGTTGGTTTTACGGAGGTTGACTGTCGGAATTACATGAGGAATAATCGCCAGAGAACTTTGGAAGGAGATATTCAACTTGTTTTGGATTATTTGAGGCAAATGCGTGCTGAAAACCCTAATTTCTTCTTTACTGTGCAAGGTGAGGAGGATCAGTGCACGAGCAACGTTTTCTGGGCTGATGCTAAGGCAAGGATGAACTATACATTTTTTGGTGATACCGTCACTTTTGACACTACTTACAGATCTAATAGATACCGGCTACCCTTTGCTCCCTTCACTGGTGTCAACCATCATGGACAACCTGTTCTTTTTGGTTGTGCTTTCATGATAAATGAATCTGAAGCATCATTTGTATGGCTTTTTAAGACATGGCTTATGGCAATGTCTGGACGTCCTCCAGTGTCAATAACAACTGATCATGATTCTGTACTAAGGTCAGCCATAATCCAAGTATTCCCTGAGACCCGTCACCGTTTCTGCAAGTGGCACATCTTTAAAAAATGCCAGGAGAAGTTATCTCACATTTTTCTCAAACATCCCAATTTTGAAGCTGAATTTCACAAATGTGTTAACCTGACTGAGTCAATCGAGGAATTTGAATCTTGCTGGTTGACACTTGTTGATAGGTATGATCTAAGGAACCATGAATGGCTTCAGTCAATTTATTCTTCCCGCCGGCAGTGGGTACCTGTCTATTTGCGAGACACATTCTTTGCAGAAATGTCCATAACTCAACGAAGTGATAGCATGAACTCATATTTTGATGGCTATGTCAATGCTTCCACCAATCTGAATCAATTTTTTAAGCTATATGAAAAGGCACTTGAAAGTCGCAATGAGAAAGAAGTAAGAGCTGATTATGACACAATGAATACTTTGCCCATATTAAGGACCCCATCTCCAATGGAAAAACAAGCATCTGAGCTGTACACAAGAAAAATTTTCATGAGGTTCCAAGAAGAGTTGGTTGGGACACTGACATTCATGGCTTCCAAGGCCGAGGATGATGGAGAGGTCATTGCATATAATGTTGCAAAATTTGGAGAGGACCATAAAGCATACTATGTTAAATTCAATGTTTTGGAGATGAAAGCAACTTGTAGCTGCCAAATGTTTGAGTTCTCAGGTCTTCTATGCAGACACGTTTTGGCTGTATTTAAAGTAACCAATGTGCTTACTCTCCCATCCCATTACATATTGAAACGTTGGACCAGAAATGCCAAGAGCAATGTAATATTAGAAGACCATTCTACTGATGTATATACTTACTATTTGGAATCTCATACTGTTAGATATAATACCCTCCGACATGAGGCCTTGAAATTTGTAGATGAAGGAGCAAAGACTCTTGAAAATTATGATATGGCAATGGTTGCTTTGCAAGAAGCTGCAAAAAGAGTTGCTGAAGCAATAAAAAGTGAGGGAAGAAGCCCCATGAGCAATGGAAAAGTTCGGAGTTGTTTGCTGAATGATGGAAGTCATACAAATTATTCAAGGGGGATTCATGAAGAAAGCTTGAGCCAGCACATGTCAGAGCAGGATGATATGGACAAGAATATCAGAGAACTTATTAGTGAGATTCAATCTGCAAACCGCAAGTGTGAAATTTACCGGTCCAACTTGCTTTCGGTTTTGAAAGCTGTTGAGGATCACAAGTCGGAGTTGTCAGTTACGGTGCAAAACATCAAGATCAGCATGAAAGATGGTATTTGA 2370 0.4287 MDNEILEFDIGLGGGDGLGDDDGGDMEQPVDEDDLAYSPAPSSGGGGAIGSGEIYLPEGDLSDLEPYEGMEFESEEAAKAFYNSYARRVGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNLNEKRTKDREIKRPRTITRVGCKASLSVKMHDSGKWIVSGFVREHNHELVPPDQVHCLRSHRQISGAAKTLIDTLQAAGMGPRRIMSALIKEYGGISNVGFTEVDCRNYMRNNRQRTLEGDIQLVLDYLRQMRAENPNFFFTVQGEEDQCTSNVFWADAKARMNYTFFGDTVTFDTTYRSNRYRLPFAPFTGVNHHGQPVLFGCAFMINESEASFVWLFKTWLMAMSGRPPVSITTDHDSVLRSAIIQVFPETRHRFCKWHIFKKCQEKLSHIFLKHPNFEAEFHKCVNLTESIEEFESCWLTLVDRYDLRNHEWLQSIYSSRRQWVPVYLRDTFFAEMSITQRSDSMNSYFDGYVNASTNLNQFFKLYEKALESRNEKEVRADYDTMNTLPILRTPSPMEKQASELYTRKIFMRFQEELVGTLTFMASKAEDDGEVIAYNVAKFGEDHKAYYVKFNVLEMKATCSCQMFEFSGLLCRHVLAVFKVTNVLTLPSHYILKRWTRNAKSNVILEDHSTDVYTYYLESHTVRYNTLRHEALKFVDEGAKTLENYDMAMVALQEAAKRVAEAIKSEGRSPMSNGKVRSCLLNDGSHTNYSRGIHEESLSQHMSEQDDMDKNIRELISEIQSANRKCEIYRSNLLSVLKAVEDHKSELSVTVQNIKISMKDGI 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0808 789 Coils Coil 732 759 - -
Prci11g0808 789 SMART 26again6 584 611 IPR006564 GO:0008270
Prci11g0808 789 MobiDBLite consensus disorder prediction 8 52 - -
Prci11g0808 789 Pfam MULE transposase domain 293 386 IPR018289 -
Prci11g0808 789 Pfam FAR1 DNA-binding domain 81 172 IPR004330 -
Prci11g0808 789 ProSiteProfiles Zinc finger SWIM-type profile. 573 609 IPR007527 GO:0008270
Prci11g0808 789 Pfam SWIM zinc finger 561 606 IPR007527 GO:0008270
Prci11g0808 789 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 60 687 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0808 Prci-Chr11 7602820 7608933 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Prci11g0808 MULE 1.1e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0808 - - gmx:100793442 1337.4