Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0796 ATGGCGAAATTCTCGCTTGGTGGGGACGACGATGGGGGGGGACCCAGTAACCCGACCCCAAAGCGACGTAGGATTGCTGTTAGCTGCGGCATCGTCGGAGAAGACGAACGACAAGAGATCGGAAACCCAAGTGGAACAGAAGACGAAAGAGATGATATAGTGCAGGAACTAGAAGTGCTACAAGGAGAAGAAGATCTACGTAATGATGATTCTGGCAATTGCTTTGGAGCCAGATCAAGCAATTGCGGTGAAGACAACAATGTTTTCGCGCCTGAAAATAGGGATAGGTCCATTTCTGTCACCCTTAGCGACCCTGACGTGTTTGATTGCTGCATCTGTTATGAACCCTTGAGTATCCCTATCTTCCAGTGCGAGAATGGGCATATTGCTTGCTCTTCCTGCTGTGTTAAACTTGGGAACAAGTGTCCCACGTGCTCTATGCCTATTGGCTACAACCGTTGCCGAGCCATTGAGAAGGTGCTGGAATCTGTTAAGATATCCTGCCTAAATGCACAATATGGTTGTAAAGAAACAATAATTTACAGTAAGAAAATTGACCATGAAAAGCAATGCATTTATGCACCACGCACATGTCCACATTCAGGTTGTAACTTTGTTGCCCCGTCGAAGGAGTTGTCACTCCACTTTCGCCGTAAACATGGGGACTCTGCGAGAAATTTTACCTATAATTGCTTCTTCTCTATCTTCCTGAGGGTTAACGATGAAGTTATTGTTCTTCAAGAACAGAATGGTGCCGATCTATTCATGCTCAAGAATAAAGTGGGTGATCTGGGGAATATAGTCAACGTTAGTTGCGTTTGTCCCAATTCATTCCAAAAGGCATGTCATTATGATATTTTGGCTAGATCCCAGGGATGCTGTCTGAAAATACATTGTTTAGCGGAGAACAATCCTGGTCGCAAAGCTAATAATACTGCTCCAACAGGGTTTCTTTTGGTCCCATCTTGGTTTTTTGATTCTTCTGGACAGCTCAAATTGGACATTCGCATTAATTAA 1017 0.4425 MAKFSLGGDDDGGGPSNPTPKRRRIAVSCGIVGEDERQEIGNPSGTEDERDDIVQELEVLQGEEDLRNDDSGNCFGARSSNCGEDNNVFAPENRDRSISVTLSDPDVFDCCICYEPLSIPIFQCENGHIACSSCCVKLGNKCPTCSMPIGYNRCRAIEKVLESVKISCLNAQYGCKETIIYSKKIDHEKQCIYAPRTCPHSGCNFVAPSKELSLHFRRKHGDSARNFTYNCFFSIFLRVNDEVIVLQEQNGADLFMLKNKVGDLGNIVNVSCVCPNSFQKACHYDILARSQGCCLKIHCLAENNPGRKANNTAPTGFLLVPSWFFDSSGQLKLDIRIN 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0796 338 ProSiteProfiles Zinc finger RING-type profile. 110 146 IPR001841 -
Prci11g0796 338 Pfam Seven in absentia protein family 153 223 IPR018121 GO:0005737|GO:0006511|GO:0007275
Prci11g0796 338 SUPERFAMILY TRAF domain-like 163 286 - -
Prci11g0796 338 ProSiteProfiles Zinc finger SIAH-type profile. 163 221 IPR013010 GO:0008270
Prci11g0796 338 CDD RING-HC_SIAHs 108 146 - -
Prci11g0796 338 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4 86 337 IPR044286 -
Prci11g0796 338 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 158 216 IPR013083 -
Prci11g0796 338 MobiDBLite consensus disorder prediction 32 51 - -
Prci11g0796 338 MobiDBLite consensus disorder prediction 1 24 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0796 106 220 C3H Transcription Factor Family AT2G41980 35.897 1.13e-20 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0796 K04506 - qsa:O6P43_009323 357.836