Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0788 ATGGCTCTGGCTCTGCATCTGCTTTTCATCTCTCTTCTTCCCCTGGCGCTCGCATCTTCTTGTCACTCCACTTGCGGCAGTATCACCATCTCTCCTCCCTTCGGAATCACTCCCAACTGCCTCCAAAGCAAGTGGTTTGAAATCGAATGCAAACAAAACTCTGACGGAACTCAAAGGCCCTATCTCAAGTTGATCCAACTGGAGGTCACCAGATTTGATTACGATTCCTGCAAGGTTTGGATCAAAAACCCAGTTTACACCAGGAACTGCAGGAACATCACCGCGCTTGTTCCCCCCGTAAACATGACTGCAAGTCCTTTTGTTTACTCTCGAGAGGACAACGTCTTTCTGGGCGTGGGCTGCCACACGCGGGCTCTTCTTCTGCAAGGCTCCCGCGTTTCCGGCGGCTGCGTCTCCATTTGCGGTCAAGACCCCAATTCTTCCGGAATCCGAGCTTGCCTCGGCAGCTATTGCTGCTCCGCTCCCCTCCCTTGGAGTCTGTCCGAATTCAACCCCAGAATTGAAGATGTGGCGGCTAACAGTTCCCCCAGGGATCCCGGTGATTGCAATTATGCGCTGATTGCAGAAGATAACGGCCGTGCTGATTGGGGAAGATGGATTCTCAGCGAGTTGAAGGATTCCGACAGTGTTCCTGCAGTGCTTGAATATCGTACCAGTTGCGCTGAAACGTCTTCCACGACGCTCAACTCAACTCTCGGACCTCAGTGTACCAGTTCTTGTGCTCCTCAAGGTGGGCAAGGGAACTCTGGATCCAGATCTCCAGGCATGTCGGTGATAGGAGTCGTTTTCTCGAGCCTAGTATCCATTGTTTTCCTTGTTGGGGTGTGGATTCAATACAAAATCTTCCGGAAAAGTAGAATGAACAAACGCAAAGAAAAATACTTCAAACAAAATGGCGGCATGCTGTTGCAACGGAGATCGTTAAACGGCGATGTCAGCTTCGACAAAACCAAACTGTTCAGCTCCAGGGACCTTGAAAAGGCCACCGACCGCTTCAACGTTAATAGAGTGCTCGGAAAGGGTGGCCAAGGCACTGTTTACAAGGGCATGCTTGCCGACGGTCAAATTGTCGCTGTCAAGAAACTCGAATTCCACGGAAATGTTGAAGAATTTATCAACGAAGTGATCATCCTTTCTCAGATTAATCACAGAAACGTGGTGAGGTTGTTAGGGTTTTGTCTGGAGACACAAGTTCCTCTGCTGGTCTACGAATTCATCCCAAACGGTAACCTCTTCGAGCACTTGCACGAACAAAATGAAGAGTTCTGCATGGTGTGGGACACGCGTTTAAGAATTGCCAGCGAGGTTGCGGGAGCTCTATTTTACTTGCATTCAGCTGCGTCTCGGCCCATTTATCATAGAGACATCAAATCGACAAACATTCTGTTGGACGACAAGTTCAGAGCAAAAGTTGCTGATTTTGGAACTTCAAGAATGGTTTCTATGGAAAAGACCCACATCACGACTCAAGTTCAGGGTACTTTTGGCTACTTGGACCCTGAGTATTTTCATACCAGTCAATTCACTGACAAGAGTGATGTGTACAGCTTCGGAGTTGTTGTGGTGGAACTTCTGACAGGTCAGGTTCCGATATCATCATCTGGAAGGCCAGCAGAAGCTCAGAGTTTGGCTTCATATTTCATAATGTGTATGGATCAAGGTCGTTTATATGATATTCTGGACCCGAGAATCATGGAAGGGGCGAAGGAGGAAATCACGGTCGTGGCAAACCTAGCAAGAAGATGCTTGAACTTGAACGGGAGGAAGAGGCCGACCATGAGAGAAGTCACAGCCGAATTAGAAGGGATTCAAAGACTGAGAAGGATGTGCTCTAACATTGAGCCGCAAAATTACGAGGAAATCGACTTCGGTGGATTGTTTGAAGGCTACCAACCTTGGACTGCTGATTACGCATCATCCGGATCCACTCTAAACACCATAGCTTCCTCATCGTCCCATGGTTTGCTTGTTTCAGAAACACAGCAGTTTGTTGACACACCACCTAACGTAGTGAAACTATAG 2043 0.4821 MALALHLLFISLLPLALASSCHSTCGSITISPPFGITPNCLQSKWFEIECKQNSDGTQRPYLKLIQLEVTRFDYDSCKVWIKNPVYTRNCRNITALVPPVNMTASPFVYSREDNVFLGVGCHTRALLLQGSRVSGGCVSICGQDPNSSGIRACLGSYCCSAPLPWSLSEFNPRIEDVAANSSPRDPGDCNYALIAEDNGRADWGRWILSELKDSDSVPAVLEYRTSCAETSSTTLNSTLGPQCTSSCAPQGGQGNSGSRSPGMSVIGVVFSSLVSIVFLVGVWIQYKIFRKSRMNKRKEKYFKQNGGMLLQRRSLNGDVSFDKTKLFSSRDLEKATDRFNVNRVLGKGGQGTVYKGMLADGQIVAVKKLEFHGNVEEFINEVIILSQINHRNVVRLLGFCLETQVPLLVYEFIPNGNLFEHLHEQNEEFCMVWDTRLRIASEVAGALFYLHSAASRPIYHRDIKSTNILLDDKFRAKVADFGTSRMVSMEKTHITTQVQGTFGYLDPEYFHTSQFTDKSDVYSFGVVVVELLTGQVPISSSGRPAEAQSLASYFIMCMDQGRLYDILDPRIMEGAKEEITVVANLARRCLNLNGRKRPTMREVTAELEGIQRLRRMCSNIEPQNYEEIDFGGLFEGYQPWTADYASSGSTLNTIASSSSHGLLVSETQQFVDTPPNVVKL 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0788 680 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 20 613 IPR045274 GO:0007166
Prci11g0788 680 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 314 412 - -
Prci11g0788 680 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Prci11g0788 680 FunFam Wall-associated receptor kinase 2 413 629 - -
Prci11g0788 680 Gene3D Transferase(Phosphotransferase) domain 1 413 628 - -
Prci11g0788 680 SUPERFAMILY Protein kinase-like (PK-like) 321 608 IPR011009 -
Prci11g0788 680 Pfam Protein kinase domain 340 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g0788 680 Gene3D Phosphorylase Kinase; domain 1 311 412 - -
Prci11g0788 680 CDD STKc_IRAK 345 610 - -
Prci11g0788 680 Pfam Wall-associated receptor kinase galacturonan-binding 21 82 IPR025287 GO:0030247
Prci11g0788 680 SMART serkin_6 339 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g0788 680 ProSiteProfiles Protein kinase domain profile. 339 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0788 Prci-Chr11 7319646 7322978 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0788 11 627 Receptor kinase-like Gene Family AT1G16260 43.636 3.67e-159 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Prci11g0788 Pkinase 2.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0788 - - pcin:129287161 1352.04