Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0773 ATGACCAAGATTACAAGATGCAGTCCGGAAGAAGCTTTGTTTGATAAGATGAAGCCAGAGGAATACTTGATTAGAGCCGAAAAAGATGATGAGAATGAGGACAAAATTGAAAATGAGCATGGTGGTGATGATGGAGAAGGTGAAGATGCTGAGATTGGCAATGATCTTCAAGATGAGGCGGCGTACTTGTCACGAGACGAAGGCCCAACTTCTACAGAGAGGGAACTTGAAAAGGGTTTTCCAGCAGAAGATGCAGATGAGGAGAATAAGTCTGCTAGACATTTCAGCCATGGATCTTACCTGGTTCAAGGAAAGCTAGACCATGGAATGGAAGATTATATTTTCGCTGAACATAGGAACATCAATGGCTACGACTTAGGGCTATATGCAATTTTTGACGGCCATGCTGGTCGAGTGGTCGCAAAATACTTGCAACGCCATCTATTTGAGAGAATATTGAATGAGCCTGATTTCTGGAAAAATCCAGTACGTGCTCTTAAGAGAACATGTAAGGCTGTAGATGAGGAGATCTTAGAAAAGATAGCAGATTCACGAGGGGGATCAACAGCTGTTGTAGCAATATTAATTAATGGAGTGAGGTTACTAGTAGCTAATGTTGGCGATTCTCGAGCAATATTATGCAGAAATGGTTCAGCAAAACAAATTACAGTAGATCATGAACCACAGAGAGAGAAGGACCTTGTTGAGAGCAGAGGAGGTTTTGTGACCAAGGCACCTGGGTGTGTTCCAAGAGTGGATGGCGTATTAGCAATGAGTAGGGCATTTGGGGATGGAAGATTGAAGGAACATATTACTGCAGAACCAGATGTGATGGTCCAAAACATCACCGAGGACACTGAGTTCATCATTTTGGCTAGTGATGGCCTCTGGAAGGTGATGACGAATGAAGAGGCTTGTGAGTGCATCAAGGATATGGATGGTGCTAAAAAAGCTGCAAAGAAGCTGGTTAAAGAAGCATTAGTTCAAGGAAGCTATGATGACATTTCATGCATTGTTGTCATGTTCTCCACTAGTTAA 1038 0.4258 MTKITRCSPEEALFDKMKPEEYLIRAEKDDENEDKIENEHGGDDGEGEDAEIGNDLQDEAAYLSRDEGPTSTERELEKGFPAEDADEENKSARHFSHGSYLVQGKLDHGMEDYIFAEHRNINGYDLGLYAIFDGHAGRVVAKYLQRHLFERILNEPDFWKNPVRALKRTCKAVDEEILEKIADSRGGSTAVVAILINGVRLLVANVGDSRAILCRNGSAKQITVDHEPQREKDLVESRGGFVTKAPGCVPRVDGVLAMSRAFGDGRLKEHITAEPDVMVQNITEDTEFIILASDGLWKVMTNEEACECIKDMDGAKKAAKKLVKEALVQGSYDDISCIVVMFSTS 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0773 345 ProSitePatterns PPM-type phosphatase domain signature. 128 136 IPR000222 GO:0043169
Prci11g0773 345 Gene3D - 77 345 IPR036457 -
Prci11g0773 345 MobiDBLite consensus disorder prediction 9 42 - -
Prci11g0773 345 SUPERFAMILY PP2C-like 90 343 IPR036457 -
Prci11g0773 345 CDD PP2Cc 95 340 IPR001932 -
Prci11g0773 345 FunFam Probable protein phosphatase 2C 39 88 343 - -
Prci11g0773 345 MobiDBLite consensus disorder prediction 68 92 - -
Prci11g0773 345 SMART PP2C_4 88 340 IPR001932 -
Prci11g0773 345 ProSiteProfiles PPM-type phosphatase domain profile. 96 342 IPR001932 -
Prci11g0773 345 PANTHER PROTEIN PHOSPHATASE 75 341 IPR015655 GO:0004722|GO:0006470
Prci11g0773 345 Pfam Protein phosphatase 2C 108 335 IPR001932 -
Prci11g0773 345 MobiDBLite consensus disorder prediction 1 92 - -
Prci11g0773 345 SMART PP2C_SIG_2 107 342 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0773 Prci-Chr11 7194320 7197942 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0773 71 342 PP2C-type Phosphatase Gene Family AT3G15260 52.536 9.30e-97 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0773 - - gmx:100814772 436.802