LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci11g0755	ATGGCCATAATGGAGAGGATTTTAGTTAAGGGACTGTTCCGTGTACTGAATCTAGTGATAATCTCAGTGATCCTAGCCACTGGGGAAGCTCAATCAAAGTCGATTTTCATTAATTGCGGTTCAAATTCTTCCGTAAATGTTGATGACAGAAGATGGATTGGGGATATGGCCCCTAATAACAATATCACCCTTAGTTCTCCTGGTATTGCTGCTTCAGCCTCCACATTAAGTGGCAATTCTTCCTTTGACCCTCTCTACAAAACCGCCAGATTTTTCACTGGTGCTTGCAATTACACAATTGAAGGTGTTCAGGGGAACTATGTTGTCAGGCTCCATTTCTGTCCCTTTGTGCTTGAGAACTACAATGTAAATGAGTCCTCATTTGATGTTGTGGCCAATGGTCTGAAACTACTGGCGGAGTTCAATGCTCCAGGAGAGATATCGCACAAGAACATGGACTTGCAGAATTCTGGAAGCAATTCAACTTCATTTTTCTTGATTAAAGAATATATTCTTGCTGTCAATTCAGGTAAGCTTGTGATTGAACTCATCCCAACGAAAAGCTCCTTTGGCTTCATCAATGCCATTGAGATTGTCCCAGTTCCAGATGAGCTTTTTGCAGGCTCTTTCAATAAAGTCGGTGGGAGTGATGCAAATTTGAATTTGACTGGACGTGGGATGGAGACCATGTACAGGTTGAATGTTGGTGGTCCCAAAATCACATCCAATGAGGATAAAGATATTTGGAGAACTTGGGAAGTGGATTCTAGCTACATGATCATAGAAAGTGCTGGGTCAGGAATAAAGAACAGTTCTAATATAACATATGCTTCACTGAATGATTCTTCAGTGGCTCCTCTCATTGTGTATGAGACTGCAAGGACAATGTCCAACACTGAAGTCTTGGAGAAAAGGTTTAACATGTCTTGGAAGTTTCAAGTGGACCCGGAATTTGAGTATATGATCCGATTACATTTCTGTGAGCTGATATTTGATAAGGCAAATGAGAGGATTTTTAGGATCTATATAAACAACAAGACAGCAGCAGATAACATCGATATATTTGTACGAGCAGGAGGGATGAATAAAGCATATCACCAGGATTATGTAGATGGTGTGTCCTCAAGAATCAACACACTGTGGGTTCAGTTAGGTCCTGATTCAGCTGCTGGTGCTGCCGGAACTGATGCCCTTTTAAATGGGCTAGAAATTTTCAAGATTAGCCGAAATGGGAAGCTGGCCTATGTAGAGAGATATGGTTCAGCAGGCAATTTAGCTAGCAAATCAAAAACTCGAATTCTTTGGATGGGAATTGGAGCAGTTCTAGCTTCTGTTGCCATAATTACATTATTAGTTGCTTTGTTTTTCTGGTTTTGCAAAAGAAGCAGGAAAACAACAAGTGATACCAAAAGCAGTGCTCCAGGTTGGCGGCCATTGTTTCTTTATGGCGCTACTGTGAACAGCACTGTTAGTGCCAAGGGATCAGCAGGACTTCAGAATCCATATGGATCAGTGGCATCAACTCGACTTGGCAAGCGGTTCACACTAGCAGAAATTCGTGCTGCGACAAAAAATTTTGATGAGGGTTTGATAATTGGAGTTGGAGGCTTTGGTAAGGTGTACAAGGGAGAGATTGATGATGGGGTCCCTGCTGCAATTAAGCGAGCCAACCCTCAGTCTGAGCAAGGTGTGGCTGAATTTGAGACAGAGATTGAGATGCTCTCGAAACTCAGGCATAGGCATCTTGTGTCCCTGATTGGATTCTGTGAAGAGCAAAATGAAATGATTTTGGTTTATGAGTATATGGCAAATGGTACTCTCAGAAGTCATCTATTTGGGAGCGATCTTCCACCACTAACTTGGAAGCAGCGCCTAGAAGTATGCATAGGAGCTGCAAGAGGACTCCATTATCTGCATACAGGTGCAGAGCGGGGGATAATCCACCGGGATGTCAAGACAACCAATATATTGTTAGATGAGAACTTTGTAGCCAAAATGTCTGATTTTGGCTTGTCAAAAGATGGTCCTACATTGGACCATACTCATGTTAGCACAGCTGTGAAAGGAAGTTTTGGTTACCTCGACCCTGAGTACTTCAGACGACAGCGGCTAACTGAGAAATCAGATGTGTACTCTTTTGGTGTTGTGTTGTTTGAAGTTGTTTGTGCTCGAGCTGTGATAAATCCTGCATTGCCTAAAGATCAAATCAATCTTGCAGAATGGGCAATGAGATGGCAGAGGCAAAGGTCGCTTGAAACTATCATCGATCCACGCCTTGCAGAAGGCTATCATCTTGAGTCCCTGTCTAAGTATGGAGAGATAGCAGAAAAATGTCTTGCTGATGAGGGGAAGAACAGGCCCACAATGGGGGAGGTGTTGTGGCACTTGGAGTATGTTCTGCAACTTCATGAAGCTTGGCTGAACACTAGAAGCAGAGAAGTTTCATTCTCAAGTAGCCAAGCTTTAAGAGGAGTGAAAGAGGGAGAACCAGAAGAGATTCAGGAGCCATTGGCTGGCGTAGTTGAAGAGAATAGCTCTGCTACAAGAGGAGGCAAGGAAATGGATGTTGCAGATTGA	2577	0.43	MAIMERILVKGLFRVLNLVIISVILATGEAQSKSIFINCGSNSSVNVDDRRWIGDMAPNNNITLSSPGIAASASTLSGNSSFDPLYKTARFFTGACNYTIEGVQGNYVVRLHFCPFVLENYNVNESSFDVVANGLKLLAEFNAPGEISHKNMDLQNSGSNSTSFFLIKEYILAVNSGKLVIELIPTKSSFGFINAIEIVPVPDELFAGSFNKVGGSDANLNLTGRGMETMYRLNVGGPKITSNEDKDIWRTWEVDSSYMIIESAGSGIKNSSNITYASLNDSSVAPLIVYETARTMSNTEVLEKRFNMSWKFQVDPEFEYMIRLHFCELIFDKANERIFRIYINNKTAADNIDIFVRAGGMNKAYHQDYVDGVSSRINTLWVQLGPDSAAGAAGTDALLNGLEIFKISRNGKLAYVERYGSAGNLASKSKTRILWMGIGAVLASVAIITLLVALFFWFCKRSRKTTSDTKSSAPGWRPLFLYGATVNSTVSAKGSAGLQNPYGSVASTRLGKRFTLAEIRAATKNFDEGLIIGVGGFGKVYKGEIDDGVPAAIKRANPQSEQGVAEFETEIEMLSKLRHRHLVSLIGFCEEQNEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLEVCIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKDGPTLDHTHVSTAVKGSFGYLDPEYFRRQRLTEKSDVYSFGVVLFEVVCARAVINPALPKDQINLAEWAMRWQRQRSLETIIDPRLAEGYHLESLSKYGEIAEKCLADEGKNRPTMGEVLWHLEYVLQLHEAWLNTRSREVSFSSSQALRGVKEGEPEEIQEPLAGVVEENSSATRGGKEMDVAD	858

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci11g0755	858	Pfam	Protein tyrosine and serine/threonine kinase	531	793	IPR001245	GO:0004672\|GO:0006468
	Prci11g0755	858	ProSiteProfiles	Protein kinase domain profile.	526	798	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci11g0755	858	MobiDBLite	consensus disorder prediction	821	858	-	-
	Prci11g0755	858	SMART	serkin_6	526	799	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci11g0755	858	Gene3D	Transferase(Phosphotransferase) domain 1	602	820	-	-
	Prci11g0755	858	PANTHER	OS07G0166700 PROTEIN	512	803	IPR045272	GO:0004714\|GO:0006468
	Prci11g0755	858	Gene3D	-	31	201	-	-
	Prci11g0755	858	Gene3D	-	226	409	-	-
	Prci11g0755	858	FunFam	Putative receptor-like protein kinase	34	201	-	-
	Prci11g0755	858	Pfam	Malectin-like domain	37	407	IPR024788	-
	Prci11g0755	858	FunFam	Receptor-like protein kinase FERONIA	226	409	-	-
	Prci11g0755	858	Gene3D	Phosphorylase Kinase; domain 1	493	601	-	-
	Prci11g0755	858	FunFam	Receptor-like protein kinase FERONIA	602	815	-	-
	Prci11g0755	858	SUPERFAMILY	Protein kinase-like (PK-like)	502	798	IPR011009	-
	Prci11g0755	858	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	646	658	IPR008271	GO:0004672\|GO:0006468
	Prci11g0755	858	FunFam	receptor-like protein kinase FERONIA	491	601	-	-
	Prci11g0755	858	ProSitePatterns	Protein kinases ATP-binding region signature.	532	554	IPR017441	GO:0005524
	Prci11g0755	858	CDD	STKc_IRAK	532	797	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci11g0755	Prci-Chr11	7088039	7091416	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci11g0755	18	836	Receptor kinase-like Gene Family	AT1G30570	65.732	0.0	1126

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Prci11g0755		Malectin_like	3.2e-37	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci11g0755	-		-	pcin:129287274	1696.02