Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0746 ATGAATAATCGGCTGGAAGTTGGGAGGGCTGCCTCAGGTAAAAGAAGACTGAGAGACCTATTGCTTCAAAAAGACAATCGTTTTTGTGCTGATTGTAATGCTCCAGATCCCAAGTGGGCGTCAGCTAATATTGGAGTTTTTATTTGCTTAAAATGTTGCGGTGTGCACAGAAGCCTTGGTACTCATGTATCAAAGGTTTTGTCTGTGACATTGGATGAATGGTCAGATGATGAAGTAGATGCAATGATTGAAGTTGGAGGAAATGCTTGTGCTAATAAAATTTATGAGGCTCATGTTCCGGAAGGATATAGTAAGCCAACACCAGATGCCAGTCATGAACAGCGTGCAAATTTCATCCGATCCAAGTATGAGCTTCAAGACTTTTTGAAACCAGGTTTACGCATTGCATCTGGAAAAAGCTCTCAGGAGTCAAATTCTTCCAACAAACTTATGGATAGTTTCCGAAGCACTAGTGGTCCGCAGAAATCGGAAGGAATGGTAGAATTTATTGGGTTGCTGAAGGTGAAAGTGGTTAAAGGCACAAATTTAGCTATTCGAGATATGATGTCTAGCGATCCATATGTCGTCTTAAAACTTGGCAACCAGACAGTTCAGACAACAGTAGTGAATAGTAACTTGAACCCAGTCTGGAATGAGGAACTTATGCTATCTGTTCCCCAGGAATATGGATCATTAAAGTTGCAAGTATATGACCATGACACATTTTCGGCGGATGATATAATGGGAGAGGCAGAAATTGATCTCCAACCTATGATAACGTCAGCAATGGCATTTGGAAATGCAGAAATGTTTGGCGATATGCAGATTGGAAAATGGCTTAAATCTGATGACAATGCTCTTATAGAGGATAGCTTAGTCAATATAGTTGATGGAAAGATTTTACAGAAAATGGCTCTCAAGCTCCAGAATGTTGAATCTGGAGAACTAGATCTAGAACTTGAATGGATGCCTCTTGATCAATAG 984 0.4024 MNNRLEVGRAASGKRRLRDLLLQKDNRFCADCNAPDPKWASANIGVFICLKCCGVHRSLGTHVSKVLSVTLDEWSDDEVDAMIEVGGNACANKIYEAHVPEGYSKPTPDASHEQRANFIRSKYELQDFLKPGLRIASGKSSQESNSSNKLMDSFRSTSGPQKSEGMVEFIGLLKVKVVKGTNLAIRDMMSSDPYVVLKLGNQTVQTTVVNSNLNPVWNEELMLSVPQEYGSLKLQVYDHDTFSADDIMGEAEIDLQPMITSAMAFGNAEMFGDMQIGKWLKSDDNALIEDSLVNIVDGKILQKMALKLQNVESGELDLELEWMPLDQ 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0746 327 CDD C2_ArfGAP 170 314 - -
Prci11g0746 327 MobiDBLite consensus disorder prediction 137 160 - -
Prci11g0746 327 FunFam ADP-ribosylation factor GTPase-activating protein AGD12 169 327 - -
Prci11g0746 327 Gene3D C2 domain 169 327 IPR035892 -
Prci11g0746 327 CDD ArfGap 17 123 - -
Prci11g0746 327 Pfam C2 domain 172 261 IPR000008 -
Prci11g0746 327 Gene3D Arf GTPase activating protein 2 133 IPR038508 -
Prci11g0746 327 ProSiteProfiles C2 domain profile. 156 268 IPR000008 -
Prci11g0746 327 FunFam Arf-GAP with dual PH domain-containing protein 1 9 137 - -
Prci11g0746 327 Pfam Putative GTPase activating protein for Arf 15 130 IPR001164 GO:0005096
Prci11g0746 327 SMART C2_3c 172 267 IPR000008 -
Prci11g0746 327 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 167 264 IPR035892 -
Prci11g0746 327 ProSiteProfiles ARF GTPase-activating proteins domain profile. 14 128 IPR001164 GO:0005096
Prci11g0746 327 SUPERFAMILY ArfGap/RecO-like zinc finger 14 130 IPR037278 -
Prci11g0746 327 PRINTS HIV Rev interacting protein signature 26 45 IPR001164 GO:0005096
Prci11g0746 327 PRINTS HIV Rev interacting protein signature 45 62 IPR001164 GO:0005096
Prci11g0746 327 PRINTS HIV Rev interacting protein signature 66 87 IPR001164 GO:0005096
Prci11g0746 327 SMART arf_gap_3 14 136 IPR001164 GO:0005096
Prci11g0746 327 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 7 327 IPR044518 GO:0005096|GO:0005543
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0746 Prci-Chr11 7037833 7044457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0746 7 327 C2H2 Transcription Factor Family AT4G21160 74.242 0.0 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0746 K12486 - qsa:O6P43_013125 539.65