Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0740 ATGGCTCTTTCTATGCACAAAGATTCACCCAACAAGCAGATGGACACGAGCAAGTACGTAAGGTATACACCTGAGCAGGTGGAGGCTTTGGAGAGGGTGTATGCAGAATGCCCAAAACCTAGTTCTTTGAGGAGACAGCAGCTCATTAGGGAGTGTCCTATACTTGCTAATATTGAGCCCAAACAGATCAAAGTTTGGTTTCAGAACCGCAGATGTCGTGAAAAGCAGAGGAAGGAATCTTCGCGACTGCAAACTGTAAACAGGAAGCTCTCTGCGATGAACAAGTTGCTAATGGAAGAGAACGATCGACTGCAGAAGCAGGTGTCACAGTTGGTGTATGAAAATGGATACATGAAGCAACAGATACATACTGCGTCTGCTACTACTACAGACAATAGCTGTGAGTCTGTGGTAATGAGTGGTCAACAACAACAGCAAAACCCAACACCTCAGCATCCCCAGAGGGATGCCAATAACCCAGCTGGTCTTCTGGCGATAGCTGAGGAGACCCTGGCAGAGTTCCTTTCCAAGGCTACTGGGACTGCTGTCGACTGGGTCCAGATGATTGGGATGAAGCCTGGTCCGGATTCTATTGGAATCGTAGCTGTTTCCCGCAATTGTAGTGGAATAGCAGCACGAGCTTGCGGCCTCGTGAGTCTTGAGCCCATGAAGGTTGCTGAGATTCTTAAAGATCGTCCATCTTGGTATCATGATTGCCGCTGCCTTGATGTGTTGAGCATAGTTCCCACTGGGAACGGGGGGACAATTGAACTCATGTACATGCAGACCTATGCACCTACAACATTGGCAGCAGCACGTGACTTTTGGACTCTTAGATACACTACGAATATGGAAGATGGAAGTCTTGTGATATGTGAGAGGTCTTTGACTTCTTCAACTGGTGGCCCTACAGGTCCTCCTGCATCAAACTTTGTTAGAGCTGAAATGCTTTCTAGTGGCTATCTAATTAGACCCTGTGAGGGTGGCGGATCCATTATTCACATTGTTGATCATGTGGATTTAGATGCTTGGAGTGTCCCTGAAGTCCTTAGGCCCCTCTATGAATCATCAAAAATCCTGGCTCAGAAAATGACTATTGCTGCCTTGCGACATATAAGGCAAATTGCTCAAGAAACAAGTGGAGAAATTCAATATGGCGGGGGCCGCCAGCCTGCTGTTTTAAGAACATTTAGTCAGAGACTTAGCAGGGGCTTCAATGATGCTGTGAATGGGTTTGTGGATGATGGCTGGTCTCTAATGGGCAGTGATGGTGCTGAGGACGTGACCATAGCCGTTAACTCATCTCCGAATAAATTTTTTGGGTCCCACTATGGTACCTCAATGTTCCCTACATTTGGAGGCGGGGTTTTATGTGCCAAGGCATCAATGCTGCTGCAGAATGTTCCTCCTGCTTTGCTTGTTCGCTTTCTGAGGGAGCATCGCTCAGAGTGGGCTGATTATGGGGTTGATGCATACTCTGCTGCATGTCTCAAGGCTAGTCCTTACACAATTCCTTGTGCAAGGCCTGGTGGCTTCCCCAGCAGTCAGGTCATTTTACCACTTGCTCATACTATTGAACATGAGGAGTTTTTGGAGGTAGTTCGTATAGAGGGTCATGCATTTTCCCCTGAAGATGTGGCTCTGGCCCGGGATATGTATCTTCTGCAGCTGTGCTATGGAATTGATGAGAATGCAATTGGATCATGTGCTCAACTTGTATTTGCACCTATTGATGAATCATTTGCTGATGATGCTGTCTTGCTTCCTTCTGGCTTCCGTGTCATACCATTGGATCCTAAAACAAATGGTTCAGCAGCAAATAGAACTTTGGATCTGGCATCTACACTTGAAGCGGGATCTGGCAATGCCCGAGCACCCGGTGACACTGATCCAAATAGTTACAATCTTAGGTCGGTCCTTACAATTGCATTTCAATTCATGTTTGAGAACCATATGCGGGACAATGTGGCTGCAATGGCTCGCCAGTATGTGCGTAGTGTTGTGGGGTCTGTTCAGAGGGTTGCCATGGCTATTGCTCCCTCTCGCCTAAGTACCCAGCTTGGGCCAAAGTCTCTTCCCGGTACTCCAGAGGCTCTTACTTTGGCACGCTGGATCTGTAGGAGCTACAGGATTCACACAGGGGGTGAGATATTTCATGTTGAGTCCACGGCAAGTGATGCTATCTTGAAGCAACTTTGGCACCATTCGGACGCAATTATGTGCTGCTCTGTAAAAGCAAATGCATCCCCTGTTTTCACCTTTGCAAACCAGGCTGGACTTGACATGCTTGAAACCACTCTCGTGGCCCTTCAAGATATAATGCTTGATAAAGTTCTTGATGAGGCTGGCAGGAAGATTCTCTGCTCTGAGTTCGCCAAGATAATGCAGCAGGGTTTTTCTTATCTGCCAGCAGGAATATGTGTCTCGAGCATGAACAGGCCAGTGTCGTATGAGCAGGCGATAGCCTGGAAAGTTCTGGATGATGATGATTCCAATCACTGCCTTGCTTTCATGTTCATGAACTGGTCTTTTGTCTAA 2538 0.472 MALSMHKDSPNKQMDTSKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILANIEPKQIKVWFQNRRCREKQRKESSRLQTVNRKLSAMNKLLMEENDRLQKQVSQLVYENGYMKQQIHTASATTTDNSCESVVMSGQQQQQNPTPQHPQRDANNPAGLLAIAEETLAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGIAARACGLVSLEPMKVAEILKDRPSWYHDCRCLDVLSIVPTGNGGTIELMYMQTYAPTTLAAARDFWTLRYTTNMEDGSLVICERSLTSSTGGPTGPPASNFVRAEMLSSGYLIRPCEGGGSIIHIVDHVDLDAWSVPEVLRPLYESSKILAQKMTIAALRHIRQIAQETSGEIQYGGGRQPAVLRTFSQRLSRGFNDAVNGFVDDGWSLMGSDGAEDVTIAVNSSPNKFFGSHYGTSMFPTFGGGVLCAKASMLLQNVPPALLVRFLREHRSEWADYGVDAYSAACLKASPYTIPCARPGGFPSSQVILPLAHTIEHEEFLEVVRIEGHAFSPEDVALARDMYLLQLCYGIDENAIGSCAQLVFAPIDESFADDAVLLPSGFRVIPLDPKTNGSAANRTLDLASTLEAGSGNARAPGDTDPNSYNLRSVLTIAFQFMFENHMRDNVAAMARQYVRSVVGSVQRVAMAIAPSRLSTQLGPKSLPGTPEALTLARWICRSYRIHTGGEIFHVESTASDAILKQLWHHSDAIMCCSVKANASPVFTFANQAGLDMLETTLVALQDIMLDKVLDEAGRKILCSEFAKIMQQGFSYLPAGICVSSMNRPVSYEQAIAWKVLDDDDSNHCLAFMFMNWSFV 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0740 845 SMART START_1 165 375 IPR002913 GO:0008289
Prci11g0740 845 Coils Coil 83 114 - -
Prci11g0740 845 ProSiteProfiles START domain profile. 156 384 IPR002913 GO:0008289
Prci11g0740 845 FunFam homeobox-leucine zipper protein ATHB-15 201 382 - -
Prci11g0740 845 SUPERFAMILY Bet v1-like 166 377 - -
Prci11g0740 845 MobiDBLite consensus disorder prediction 133 156 - -
Prci11g0740 845 CDD homeodomain 18 78 IPR001356 GO:0003677
Prci11g0740 845 SUPERFAMILY Bet v1-like 413 600 - -
Prci11g0740 845 SMART HOX_1 15 81 IPR001356 GO:0003677
Prci11g0740 845 Pfam START domain 166 373 IPR002913 GO:0008289
Prci11g0740 845 CDD bZIP 70 109 - -
Prci11g0740 845 Gene3D - 10 84 - -
Prci11g0740 845 ProSiteProfiles 'Homeobox' domain profile. 13 77 IPR001356 GO:0003677
Prci11g0740 845 SUPERFAMILY Homeodomain-like 18 79 IPR009057 -
Prci11g0740 845 Pfam MEKHLA domain 700 844 IPR013978 -
Prci11g0740 845 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 14 845 IPR044830 GO:0003700
Prci11g0740 845 CDD START_ArGLABRA2_like 160 376 - -
Prci11g0740 845 MobiDBLite consensus disorder prediction 133 158 - -
Prci11g0740 845 Pfam Homeodomain 18 76 IPR001356 GO:0003677
Prci11g0740 845 Gene3D - 201 382 IPR023393 -
Prci11g0740 845 FunFam Homeobox-leucine zipper protein REVOLUTA 18 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0740 Prci-Chr11 6993530 7000509 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0740 5 845 Homeobox Transcription Factor Family AT2G34710 79.763 0.0 1414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Prci11g0740 START 7.1e-53 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0740 K09338 - cave:132170336 1555.81