Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0723 ATGAAAGAGGGAGGAAGGAAGCAGGGTGCAGCGTCACCGTGTGCAGCATGCAAACTGCTTCGAAGAAGATGTGCCAACGACTGTGTCTTCGCTCCTTATTTCCCTGCCGATGAGCCCCACAAGTTCGCTAATGTTCACAAAGTCTTCGGTGCCAGTAATGTCAACAAGATGCTTCAGGAGCTACCAGTGCATCAAAGAGGGGATGCAGTGAGCAGTATGGTGTATGAGGCGAACGCAAGAGTGAGAGATCCAGTGTATGGGTGTGTTGGGGCCATCTCTTCTCTTCAGAGACAGATTGATTTGCTTCAGACCCAATTGGCCTTGGCCCAGGCAGAGGTGGTCCATCTTAGGGTTAGCCAATCTGCTTCACTTTCCAACCAGGGGCTCAGCCCAACTGGTAGTGACTCTCCGCCACCTTCCAAGCATTTTGTTGACATGGAATTATTGATGGACCATTCCACTTATTCTGATTCAATGTGGCACTGCTAG 489 0.5031 MKEGGRKQGAASPCAACKLLRRRCANDCVFAPYFPADEPHKFANVHKVFGASNVNKMLQELPVHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQRQIDLLQTQLALAQAEVVHLRVSQSASLSNQGLSPTGSDSPPPSKHFVDMELLMDHSTYSDSMWHC 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0723 162 Coils Coil 92 112 - -
Prci11g0723 162 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
Prci11g0723 162 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 10 125 - -
Prci11g0723 162 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0723 Prci-Chr11 6820492 6822737 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0723 1 162 AS2 family AT1G31320 70.349 4.84e-76 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Prci11g0723 LOB 1.6e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0723 - - pop:7477807 259.61