Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0715 ATGGACAGGGGTGGATATTATTATGGTGGCGCCGGTCGCTACAGGGGAGCGCCAAGAGGCCGGAATGTCGGCAGATCGGGGGGAGGACCACCGCGCGGCGGTGGTGGAAGAGACTTTCATCGCCAGCCACAGCCTCACTATGATCGTTCCGGCGAGGATGCCTGGAGAGGCGGTTATGGTAGAGGAGGATTTGATAGAGGGAGGCCTCACTATGATCGTTCCGGCGATGAGGCGAGGCGAGGCGGTTATGTTAGAGGAGGACTTGATAGAGGGGGTGCCAGGGGAAGAGGCAGAGGTCATGCCAGAGACGCTGCTGGACCTTCGGTTTGGGTACCCAGTGAATCCGTTCAGCCTCGCAATTCTGCTGCTCCTGATCCAGTTCCCGAATCGGAACCACGGCAAATTTCACAATCGGTTTCAATCTCATCTCCTACTACCCAGGTGATGAAAGATAAAATTTCACCAGTTCACAGGCCTGACAAGGGTGGTACATTATCGGTTCGAGATAGCAAGCTTCGTGTCAACCACTTTCCTCTCACATTTAAACCTGACACTATAATCATGCATTATAACGTTGATGTGAAGCCCATGTCACCTGCCAGACCTGGTCGACCTCAAAGAATATCAAAGTCTGACCTCTCTATGATTAGGGAGACATTGTTTTCTGGTGACACTAGGTTGCCATTGGAGAAGACAGTGTATGATGGAGAAAAAAATATTCTCAGTGCGGTTCGTTTACCAGAAGAAACTTTTACGGTGACTATCTCGGCGGGAGAGGATGAGAGAAGCTATTCATATCAGGTCACCTTGACACTCGTTAATGAGCTTGAGTATCGCAAGTTGAGCAAGTACCTCAATAAGGAGCTTATGTCAATTCCCAGAGACATTTTGCAAGGGATGGATATAGTGTTCAAGGAAAATCCAGCCAAGCGTACAATCTCTCTGGGACGTAGCTTCTATCCTTCAAATCCTCCATTGTTACATGAGGATCTTCACCATGGCATAATTGCAATAGGAGGGTTTCAACACAGTTTGAAGCCTACATCTCAGGGTCTGTCCTTATGTCTGGACTACTCAGTTTTATCTTTTCGAAAGCGAATGTCAGTGTTGGATTTCCTATGTGAACGTATTTCTAATTTTAGGTTGGAAGAATTCGGACGTTTCAGGAATCGTGTTACGACGGAATTGATTGGGTTGAAGGTAAATGTGACACACCGTAGAACCAGGCAGAAATTCACCATTGTTGGGTTATCACCCCGTAACACAAGGGATACCACCTTTCCTCTTAAGGATCCAGAGGGCCGTAATGACCCACAGCAAGTTACAATTCTTGACTATTTCTGGGACAAATACAATAAGGATATTGCATTCCGAGATATTCCTTGCTTAGATTTTGGGAAAGGTGTCTATGTGCCAATGGAGTTTTGCATCTTAGTTGAGGGTCAGAGATATCCCAAAGAGTACTTGGATAGAAATGCTTCCAAGAAGTTGAAAGGTATGTCACTGGCCGATCCAAAGGACAGACAGAGTGTCATACAAAGGATGGTGGAGTCAAGTGATGGACCTTGCGGTGGTGGTGTTATTCAGAATTTTGGAATGGAAGTCAACACAACCATGACTTCTGTTTTAGGACGCATTATTGAGCCACCGAGATTGAAAGTAGGTGGTCGGAATGGCCAGATTATGACAGTAAAGTTGGATACGGAGAGATGCCATTGGAATCTAGTTGGAAGATCTGTGATGAAAGGCAAGCCAGTTGAGCGTTGGGGCATTATTGATTTTACAAGCTTCGAGTCAGATTTCCGGTTCAAATTAAGATGTAAGGAATTTATTCCTAAGCTCAAGGAAAAATTTAGAAGTTTGGGCATTGGCATGAGTGATCCTCTTTGGGTTGAACGGTCTTCGATGAATCAACTTGAAAGTCATGGTTCACTGTCTGCATTACTTAAGAAAGTGAGCGATTGGGGTTATGTGCAATTTATTCTGTGTGTGATGTCACAGAAACATTTTGGGTACAAGATGCTCAAGTGGATCTCAGAGACCAAGGTTGGTGTGGTGACGCAATGTTGTTTATCTGGTACTGTGAACACAGGAAATGATCAGAATTTTACAAATCTTGCTCTCAAGATCAATGCCAAACTTGGAGGTAGCAATGTTGAGCTTGAGAATAGGCTCCCTTGCTTTGCAGGCGATGGGCATGTTATGTTTATAGGGGCAGATGTCAATCATCCTGCTGCTCGAGACGTTAATAGTCTGTCCATTGCTGCAGTGGTTGGAACTGTCAACTGGCCTGCTGCAAATCGTTATGCGGCACGTGTTAGCCCTCAATCCCATCGGAAAGAACAAATATTGAATTTTGGAACAATTTGCCTGGAGCTTGTGAACTGCTATGCAAAGCTGAACACAGTGAGACCAGAAAAAATTGTTGTTTTCCGTGATGGGGTGAGTGAGGGCCAGTTTGACATGGTTCTGAATGAAGAGCTGCAAGATCTGAAAAGGGTTTTCCGAAGCGCAGAGTATTTTCCAACTATAACTCTGATTGTAGCGCAGAAGCGACATCAGACTCGGTTGTTCCGAGAGGAGCCTTCTGTCGGAAATGTATATCCGGGAACAGTGGTGGACACAACAGTGGTACACCCTTTTGAATTTGACTTCTACCTTTGTAGCCACTATGGAAGCTTGGGGACCAGCAAGCCCACTCACTATCATGTGTTGTGGGATGAGCACAGGTTTACCTCTGATGCCTTGCAGAAGCTCATATATGATATGTGCTTTACCTTTGCAAGGTGCACTAAACCTGTGTCTTTAGTCCCTCCTGTGTACTATGCTGATCTCGTTGCCTATCGAGGACGGTTATACTATGAAGCAAAGACCGAGTTGGAGAGCTCGAAGCCGGCATCGATTCCTCCTTCATCTGCTAATGAACAGAGATATTTCAAGCTGCACGGGCACCTGGAAGACATGATGTTCTTTGTCTGA 2979 0.4575 MDRGGYYYGGAGRYRGAPRGRNVGRSGGGPPRGGGGRDFHRQPQPHYDRSGEDAWRGGYGRGGFDRGRPHYDRSGDEARRGGYVRGGLDRGGARGRGRGHARDAAGPSVWVPSESVQPRNSAAPDPVPESEPRQISQSVSISSPTTQVMKDKISPVHRPDKGGTLSVRDSKLRVNHFPLTFKPDTIIMHYNVDVKPMSPARPGRPQRISKSDLSMIRETLFSGDTRLPLEKTVYDGEKNILSAVRLPEETFTVTISAGEDERSYSYQVTLTLVNELEYRKLSKYLNKELMSIPRDILQGMDIVFKENPAKRTISLGRSFYPSNPPLLHEDLHHGIIAIGGFQHSLKPTSQGLSLCLDYSVLSFRKRMSVLDFLCERISNFRLEEFGRFRNRVTTELIGLKVNVTHRRTRQKFTIVGLSPRNTRDTTFPLKDPEGRNDPQQVTILDYFWDKYNKDIAFRDIPCLDFGKGVYVPMEFCILVEGQRYPKEYLDRNASKKLKGMSLADPKDRQSVIQRMVESSDGPCGGGVIQNFGMEVNTTMTSVLGRIIEPPRLKVGGRNGQIMTVKLDTERCHWNLVGRSVMKGKPVERWGIIDFTSFESDFRFKLRCKEFIPKLKEKFRSLGIGMSDPLWVERSSMNQLESHGSLSALLKKVSDWGYVQFILCVMSQKHFGYKMLKWISETKVGVVTQCCLSGTVNTGNDQNFTNLALKINAKLGGSNVELENRLPCFAGDGHVMFIGADVNHPAARDVNSLSIAAVVGTVNWPAANRYAARVSPQSHRKEQILNFGTICLELVNCYAKLNTVRPEKIVVFRDGVSEGQFDMVLNEELQDLKRVFRSAEYFPTITLIVAQKRHQTRLFREEPSVGNVYPGTVVDTTVVHPFEFDFYLCSHYGSLGTSKPTHYHVLWDEHRFTSDALQKLIYDMCFTFARCTKPVSLVPPVYYADLVAYRGRLYYEAKTELESSKPASIPPSSANEQRYFKLHGHLEDMMFFV 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0715 992 Gene3D - 546 723 - -
Prci11g0715 992 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 170 958 - -
Prci11g0715 992 Pfam N-terminal domain of argonaute 171 303 IPR032474 -
Prci11g0715 992 SMART Piwi_a_2 660 955 IPR003165 GO:0003676
Prci11g0715 992 CDD PAZ_argonaute_like 367 479 - -
Prci11g0715 992 Pfam PAZ domain 376 492 IPR003100 GO:0005515
Prci11g0715 992 SUPERFAMILY Ribonuclease H-like 657 955 IPR012337 -
Prci11g0715 992 SMART PAZ_2_a_3 371 503 IPR003100 GO:0005515
Prci11g0715 992 FunFam Protein argonaute 7 361 484 - -
Prci11g0715 992 Pfam Piwi domain 661 954 IPR003165 GO:0003676
Prci11g0715 992 Pfam Argonaute linker 1 domain 315 365 IPR014811 -
Prci11g0715 992 Gene3D paz domain 362 484 - -
Prci11g0715 992 SMART DUF1785_2 313 366 IPR014811 -
Prci11g0715 992 CDD Piwi_ago-like 527 954 IPR045246 -
Prci11g0715 992 MobiDBLite consensus disorder prediction 63 84 - -
Prci11g0715 992 MobiDBLite consensus disorder prediction 39 55 - -
Prci11g0715 992 MobiDBLite consensus disorder prediction 1 166 - -
Prci11g0715 992 MobiDBLite consensus disorder prediction 131 150 - -
Prci11g0715 992 ProSiteProfiles Piwi domain profile. 660 955 IPR003165 GO:0003676
Prci11g0715 992 SUPERFAMILY PAZ domain 363 518 IPR036085 GO:0005515
Prci11g0715 992 Gene3D - 728 992 IPR036397 GO:0003676
Prci11g0715 992 ProSiteProfiles PAZ domain profile. 367 480 IPR003100 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0715 Prci-Chr11 6750778 6755090 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0715 115 958 Eukaryotic Initiation Factors Gene Family AT1G48410 34.361 4.33e-139 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0715 K11593 - gmx:100805250 1128.62