Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0714 ATGGTGGCGCCGGTCGCTACAGGGGAGCGCCAAGAGGCCGGAATGTCGGCAGATCGGGGGGAGGACCACCGCGCGGCGGTGGTGGAAGAGACTTTCATCGCCAGCCACAGCCTCACTATGATCGTTCCGGCGAGGATGCCTGGAGAGGCGGTTATGGTAGAGGAGGATTTGATAGAGGGAGGCCTCACTATGATCGTTCCGGCGATGAGGCGAGGCGAGGCGGTTATGTTAGAGGAGGACTTGATAGAGGGGGTGCCAGGGGAAGAGGCAGAGGTCATGCCAGAGACGCTGCTGGACCTTCGGTTTGGGTACCCAGTGAATCCGTTCAGCCTCGCAATTCTGCTGCTCCTGATCCAGGTGATGAAAGATAAAATTTCACCAGTTCACAGGCCTGACAAGGGTGGTACATTATCGGTTCGAGATAGCAAGCTTCGTGTCAACCACTTTCCTCTCACATTTAAACCTGACACTATAATCATGCATTATAACGTTGATGTGAAGCCCATGTCACCTGCCAGACCTGGTCGACCTCAAAGAATATCAAAGTCTGACCTCTCTATGATTAGGGAGACATTGTTTTCTGGTGACACTAGGTTGCCATTGGAGAAGACAGTGTATGATGGAGAAAAAAATATTCTCAGTGCGGTTCGTTTACCAGAAGAAACTTTTACGGTGACTATCTCGGCGGGAGAGGATGAGAGAAGCTATTCATATCAGGTCACCTTGACACTCGTTAATGAGCTTGAGTATCGCAAGTTGAGCAAGTACCTCAATAAGGAGCTTATGTCAATTCCCAGAGACATTTTGCAAGGGATGGATATAGTGTTCAAGGAAAATCCAGCCAAGCGTACAATCTCTCTGGGACGTAGCTTCTATCCTTCAAATCCTCCATTGTTACATGAGGATCTTCACCATGGCATAATTGCAATAGGAGGGTTTCAACACAGTTTGAAGCCTACATCTCAGGGTCTGTCCTTATGTCTGGACTACTCAGTTTTATCTTTTCGAAAGCGAATGTCAGTGTTGGATTTCCTATGTGAACGTATTTCTAATTTTAGGTTGGAAGAATTCGGACGTTTCAGGAATCGTGTTACGACGGAATTGATTGGGTTGAAGGTAAATGTGACACACCGTAGAACCAGGCAGAAATTCACCATTGTTGGGTTATCACCCCGTAACACAAGGGATACCACCTTTCCTCTTAAGGATCCAGAGGGCCGTAATGACCCACAGCAAGTTACAATTCTTGACTATTTCTGGGACAAATACAATAAGGATATTGCATTCCGAGATATTCCTTGCTTAGATTTTGGGAAAGGTGTCTATGTGCCAATGGAGTTTTGCATCTTAGTTGAGGGTCAGAGATATCCCAAAGAGTACTTGGATAGAAATGCTTCCAAGAAGTTGAAAGGTATGTCACTGGCCGATCCAAAGGACAGACAGAGTGTCATACAAAGGATGGTGGAGTCAAGTGATGGACCTTGCGGTGGTGGTGTTATTCAGAATTTTGGAATGGAAGTCAACACAACCATGACTTCTGTTTTAGGACGCATTATTGAGCCACCGAGATTGAAAGTAGGTGGTCGGAATGGCCAGATTATGACAGTAAAGTTGGATACGGAGAGATGCCATTGGAATCTAGTTGGAAGATCTGTGATGAAAGGCAAGCCAGTTGAGCGTTGGGGCATTATTGATTTTACAAGCTTCGAGTCAGATTTCCGGTTCAAATTAAGATGTAAGGAATTTATTCCTAAGCTCAAGGAAAAATTTAGAAGTTTGGGCATTGGCATGAGTGATCCTCTTTGGGTTGAACGGTCTTCGATGAATCAACTTGAAAGTCATGGTTCACTGTCTGCATTACTTAAGAAAGTGAGCGATTGGGGTTATGTGCAATTTATTCTGTGTGTGATGTCACAGAAACATTTTGGGTACAAGATGCTCAAGTGGATCTCAGAGACCAAGGTTGGTGTGGTGACGCAATGTTGTTTATCTGGTACTGTGAACACAGGAAATGATCAGAATTTTACAAATCTTGCTCTCAAGATCAATGCCAAACTTGGAGGTAGCAATGTTGAGCTTGAGAATAGGCTCCCTTGCTTTGCAGGCGATGGGCATGTTATGTTTATAGGGGCAGATGTCAATCATCCTGCTGCTCGAGACGTTAATAGTCTGTCCATTGCTGCAGTGGTTGGAACTGTCAACTGGCCTGCTGCAAATCGTTATGCGGCACGTGTTAGCCCTCAATCCCATCGGAAAGAACAAATATTGAATTTTGGAACAATTTGCCTGGAGCTTGTGAACTGCTATGCAAAGCTGAACACAGTGAGACCAGAAAAAATTGTTGTTTTCCGTGATGGGGTGAGTGAGGGCCAGTTTGACATGGTTCTGAATGAAGAGCTGCAAGATCTGAAAAGGGTTTTCCGAAGCGCAGAGTATTTTCCAACTATAACTCTGATTGTAGCGCAGAAGCGACATCAGACTCGGTTGTTCCGAGAGGAGCCTTCTGTCGGAAATGTATATCCGGGAACAGTGGTGGACACAACAGTGGTACACCCTTTTGAATTTGACTTCTACCTTTGTAGCCACTATGGAAGCTTGGGGACCAGCAAGCCCACTCACTATCATGTGTTGTGGGATGAGCACAGGTTTACCTCTGATGCCTTGCAGAAGCTCATATATGATATGTGCTTTACCTTTGCAAGGTGCACTAAACCTGTGTCTTTAGTCCCTCCTGTGTACTATGCTGATCTCGTTGCCTATCGAGGACGGTTATACTATGAAGCAAAGACCGAGTTGGAGAGCTCGAAGCCGGCATCGATTCCTCCTTCATCTGCTAATGAACAGAGATATTTCAAGCTGCACGGGCACCTGGAAGACATGATGTTCTTTGTCTGA 2895 0.4577 MVAPVATGERQEAGMSADRGEDHRAAVVEETFIASHSLTMIVPARMPGEAVMVEEDLIEGGLTMIVPAMRRGEAVMLEEDLIEGVPGEEAEVMPETLLDLRFGYPVNPFSLAILLLLIQVMKDKISPVHRPDKGGTLSVRDSKLRVNHFPLTFKPDTIIMHYNVDVKPMSPARPGRPQRISKSDLSMIRETLFSGDTRLPLEKTVYDGEKNILSAVRLPEETFTVTISAGEDERSYSYQVTLTLVNELEYRKLSKYLNKELMSIPRDILQGMDIVFKENPAKRTISLGRSFYPSNPPLLHEDLHHGIIAIGGFQHSLKPTSQGLSLCLDYSVLSFRKRMSVLDFLCERISNFRLEEFGRFRNRVTTELIGLKVNVTHRRTRQKFTIVGLSPRNTRDTTFPLKDPEGRNDPQQVTILDYFWDKYNKDIAFRDIPCLDFGKGVYVPMEFCILVEGQRYPKEYLDRNASKKLKGMSLADPKDRQSVIQRMVESSDGPCGGGVIQNFGMEVNTTMTSVLGRIIEPPRLKVGGRNGQIMTVKLDTERCHWNLVGRSVMKGKPVERWGIIDFTSFESDFRFKLRCKEFIPKLKEKFRSLGIGMSDPLWVERSSMNQLESHGSLSALLKKVSDWGYVQFILCVMSQKHFGYKMLKWISETKVGVVTQCCLSGTVNTGNDQNFTNLALKINAKLGGSNVELENRLPCFAGDGHVMFIGADVNHPAARDVNSLSIAAVVGTVNWPAANRYAARVSPQSHRKEQILNFGTICLELVNCYAKLNTVRPEKIVVFRDGVSEGQFDMVLNEELQDLKRVFRSAEYFPTITLIVAQKRHQTRLFREEPSVGNVYPGTVVDTTVVHPFEFDFYLCSHYGSLGTSKPTHYHVLWDEHRFTSDALQKLIYDMCFTFARCTKPVSLVPPVYYADLVAYRGRLYYEAKTELESSKPASIPPSSANEQRYFKLHGHLEDMMFFV 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0714 964 SUPERFAMILY PAZ domain 335 490 IPR036085 GO:0005515
Prci11g0714 964 Pfam Piwi domain 633 926 IPR003165 GO:0003676
Prci11g0714 964 SMART Piwi_a_2 632 927 IPR003165 GO:0003676
Prci11g0714 964 ProSiteProfiles PAZ domain profile. 339 452 IPR003100 GO:0005515
Prci11g0714 964 Gene3D - 518 695 - -
Prci11g0714 964 SMART DUF1785_2 285 338 IPR014811 -
Prci11g0714 964 ProSiteProfiles Piwi domain profile. 632 927 IPR003165 GO:0003676
Prci11g0714 964 Gene3D - 700 964 IPR036397 GO:0003676
Prci11g0714 964 CDD PAZ_argonaute_like 339 451 - -
Prci11g0714 964 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 142 930 - -
Prci11g0714 964 MobiDBLite consensus disorder prediction 1 21 - -
Prci11g0714 964 Gene3D paz domain 334 456 - -
Prci11g0714 964 CDD Piwi_ago-like 499 926 IPR045246 -
Prci11g0714 964 SMART PAZ_2_a_3 343 475 IPR003100 GO:0005515
Prci11g0714 964 Pfam PAZ domain 348 464 IPR003100 GO:0005515
Prci11g0714 964 FunFam Protein argonaute 7 333 456 - -
Prci11g0714 964 Pfam N-terminal domain of argonaute 143 275 IPR032474 -
Prci11g0714 964 Pfam Argonaute linker 1 domain 287 337 IPR014811 -
Prci11g0714 964 SUPERFAMILY Ribonuclease H-like 629 927 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0714 Prci-Chr11 6750778 6755091 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0714 130 930 Eukaryotic Initiation Factors Gene Family AT1G48410 35.164 7.06e-139 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0714 K11593 - gmx:100805250 1121.69