Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0649 ATGAAGAGCCAAGGAGAGCGTGTCAGACTGTACGTGAGAGGGACAATCCTTGGATACAAGAGGTCCAAATCAAACCAGTATCCTAACACCTCTCTTATTCAAATTGAGGGAGTTAACACCAAGGAAGAGGTAGCATGGTATTGTGGCAAGCGAATGGCATATATTTACAAGGCCAAGGTTAAGAAGAATGGATCCCATTACCGCTGTATTTGGGGTAAGGTTACCAGGCCTCATGGTAACAGTGGTGTTGTCCGAGCAAAGTTCAAATCAAATCTTCCACCCAAATCAATGGGGGCTAAGGTTAGAGTATTCATGTACCCAAGCAATATATGA 333 0.4384 MKSQGERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEEVAWYCGKRMAYIYKAKVKKNGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPKSMGAKVRVFMYPSNI 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0649 110 Pfam Ribosomal protein L35Ae 10 104 IPR001780 GO:0003735|GO:0005840|GO:0006412
Prci11g0649 110 FunFam 60S ribosomal protein L35a 5 110 - -
Prci11g0649 110 SUPERFAMILY Translation proteins 10 104 IPR009000 -
Prci11g0649 110 Gene3D translation elongation factor selb, chain A, domain 4 4 110 IPR038661 -
Prci11g0649 110 PANTHER 60S RIBOSOMAL PROTEIN L35A 3 110 IPR001780 GO:0003735|GO:0005840|GO:0006412
Prci11g0649 110 ProSitePatterns Ribosomal protein L35Ae signature. 72 93 IPR018266 GO:0003735|GO:0005840|GO:0006412
Prci11g0649 110 Hamap 50S ribosomal protein L35Ae [rpl35ae]. 12 104 IPR001780 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0649 Prci-Chr11 6227173 6229601 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0649 4 110 Cytoplasmic Ribosomal Protein Gene Family AT1G74270 92.523 1.17e-71 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0649 K02917 - nnu:104593384 223.016