Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0606 ATGTATGAGCATTCATCATCCTTTGATCCAAGCGCAATAGTAGATGGCACTGTCTCGCTAAAAGACAGCATTCCCGACGCGCCGCCGCTCATGGCTGCCGGCAACCTTACAAGCAATAACAATGGCTTGGAAGAAAACCTCAGGCTAACGGTGGAGGAGCTCTCCTATCATCATCACCAGCACCAGAATCATCCACCGCCGCACCCAGAAAACGTATCGGCCTTTGCTAACGGCGTCGCCGCCGCACCATTGGACATCTCGCACCCTCAACATCTTGTTCTGAACGTAGAAAACTCGTACAACAACGAGAATTTGGTTCATCAAGTCATTGATGCTCTCTCTTATGACCAATCCACTTGGGACCCTAAAGTTCAAGAGTTGCAGGATGTGGGTTATTCTAACCACCACCATGAACAACAGCAACCCCAACAATTTCAGCAAATTGAAACCCAAAGCTACAATTCTTCTTCCATACTTGACCCTCCTCCTCCTTACCCTCCTTCTAATCTCCTCGACCTCCTCCATTTCAACCCATCCCAGAAGATACCCAATATCCCAAATTCCATGGGATTTCTCGGTGACATTCCTATAGGATCAGATAGCGCAAGCGCGTGCTCTGTCTTGTATGATCCTCTGCTTCATTTGAATCTGCCTCCGCAGCCTCTAGCGCTAAGGGAGCTCTTTCAGTCTCTTCCTCGGGGCTATAGCTTGCCAACTAGTTCCAGAAATGGTTCTCTTTTTGGTGGAGGGGATGAGATAGAGGGGAATGGGATTGTGTATCAGGATGGAGATGGAAGCCAGCTTGACAATGGAGTTCTGGAATTCGACAGAGGGACTGCCCGTGTCAGCAAAGGAAGACAAGGAAAAGGCACCAAGCATTTTGCCACTGAGAAACAAAGAAGAGAGCAATTGAATGGCAAATACAATGTCTTGAGGAGTTTGATCCCAAGCCCTACCAAGATGGACAGGGCATCTGTTGTGGGAGACGCGATTAAATATATAAAAGAACTGATGAGAACAGTGAATGAGTTGAAATTGTTGGTGGAGAAGAAAAGATTTGGAATGGACAGGTGCAAGAGGCACAAAGGTGAAGATGATGCTGGAGAGAGCTGTAACATGAAGCCCTATGGTGATCATCCAGAGGGATGCATAAGGACCTCGTGGCTTCAGAGGAAGTCCAAAGACACTGAGGTCGACGTCAGGATCATCGATGATGAAGTCACTATCAAGCTCGTTCAGAGGAAGAAGATCAGCTGCTTGCTGTTTGTCTCCAGGGTTCTGGATGAACTCCAGCTGGATCTTCACCATGTTGCAGGTGGACATGTTGGTGAATACTGCAGTTTCTTGTTCAATAGCAAGATATGTGAAGGTTCTTCAGTGTATGCAAGCGCCATAGCCAACAAGGTGATTGAGGTTTTAGACAGGCAGTATGCAGCAGCTGTTCCACATACTACCGGTAGCTACTAA 1467 0.4744 MYEHSSSFDPSAIVDGTVSLKDSIPDAPPLMAAGNLTSNNNGLEENLRLTVEELSYHHHQHQNHPPPHPENVSAFANGVAAAPLDISHPQHLVLNVENSYNNENLVHQVIDALSYDQSTWDPKVQELQDVGYSNHHHEQQQPQQFQQIETQSYNSSSILDPPPPYPPSNLLDLLHFNPSQKIPNIPNSMGFLGDIPIGSDSASACSVLYDPLLHLNLPPQPLALRELFQSLPRGYSLPTSSRNGSLFGGGDEIEGNGIVYQDGDGSQLDNGVLEFDRGTARVSKGRQGKGTKHFATEKQRREQLNGKYNVLRSLIPSPTKMDRASVVGDAIKYIKELMRTVNELKLLVEKKRFGMDRCKRHKGEDDAGESCNMKPYGDHPEGCIRTSWLQRKSKDTEVDVRIIDDEVTIKLVQRKKISCLLFVSRVLDELQLDLHHVAGGHVGEYCSFLFNSKICEGSSVYASAIANKVIEVLDRQYAAAVPHTTGSY 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0606 488 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 288 337 IPR011598 GO:0046983
Prci11g0606 488 PANTHER TRANSCRIPTION FACTOR BHLH91 17 480 IPR045895 GO:0006355|GO:0048658
Prci11g0606 488 SMART finulus 294 343 IPR011598 GO:0046983
Prci11g0606 488 CDD bHLH_AtMYC1_like 293 354 IPR045896 -
Prci11g0606 488 MobiDBLite consensus disorder prediction 133 157 - -
Prci11g0606 488 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 290 356 IPR036638 GO:0046983
Prci11g0606 488 Pfam Helix-loop-helix DNA-binding domain 291 337 IPR011598 GO:0046983
Prci11g0606 488 MobiDBLite consensus disorder prediction 134 157 - -
Prci11g0606 488 Gene3D - 282 352 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0606 Prci-Chr11 5994071 5996713 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0606 8 482 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31220 37.475 5.11e-84 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Prci11g0606 HLH 6.1e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0606 - - gmx:100782512 606.29