LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci11g0594	ATGTTAGACGCTCCCGGTTCTGGTCGTGATTCCGAGCTTAGTTTGGAGGCTCTCAGTTCAACCCAGCGAAGTTCCATGAGCAGCGAAAGCATTTGCAGCACCAGTTTCAGCCGTCTCTCCTTCGAACTCCTTCCTACGTCGCCCGAAAGCCTCTCCCTCAAGCCTCATCGGTCGTCGGACTTTGAATACTCCGCTATCCGCTCCGCCACGTTCCGCCGCAAGACGGGCCTCACCTTCCGCGACTTCCATCTCCTCCGTCGCATCGGTGCCGGTGACATCGGCACGGTCTTCCTCTGCCGCCTACGCAACAGCAGTTACGCCGAAGACGATCGGTTTGTCACCGGCACGGAGGACGATGTCGTTGTCAACCGCGAGGACGATGGTTGCTGCCTGTATGCCATGAAGGTGGTGGACAAAGACGCGGTGGCATTGAAGAACAAGTCTGAGAGGGCGGAGATGGAGAGGAAGATTCTCAAGATGCTGGATCATCCTTTCCTCCCCACGCTTTACGCCGAGTTCGAGGCTTCACACTTCTCTTGCATTGTCATGGAGTTCTGTTCCGGTGGGGACTTGCACTCCCTACGCCATAGACAGCCTCAGAAGCGATTTCCTCTCTCCTCTGCAAGGTTTTATGCTGCAGAAGTGCTCGTGGCATTGGAGTACCTTCACATGCTGGGAATCATTTACAGAGATCTGAAACCGGAGAACGTGTTGGTTAGATCCGACGGCCACATCATGCTCTCCGATTTTGATCTCTCGATGTGTTCTGACGCAATCCCAGCCGTTGAATCCTCTGACTTATCTCCCGATCCTGCGTTCCGAGATACCGTACCGTGTACCCGCCCGCACTCTAATCCGTTCTCGTGCCTCCCTAACCGGATTTTTCGGTCCCGCAAGGTCCAAACCCTTTTCCCAAACCGACTATTCGTGGCCGAGCCGGTATCTGCTCGGTCATGCTCCTTTGTAGGGACCCACGAGTACGTCTCTCCGGAGGTCGCCTCTGGCCACTCTCACGGCAACGCCGTCGACTGGTGGTCCTTCGGAATATTCATCTACGAGCTCATTTACGGGAGAACACCGTTTGCAGCCCCTACGAACGAGGCTACGCTGCGAGGCATCATCAAGAAGCCCCTCACCTTCCCCACCGCCACGCCGTATAGCACGCTTGAGCTACACGCGCGTGACCTGATATTCAATTTGCTTCACAAAGACCCTACCCGGAGACTCGGGTCAAAGCGGGGCGCGGCAGACGTGAAGAAGCACGCGTTCTTTAAAGGTCTGAACTTTGCTTTGATACGGATGATGACGCCACCAGAGGTACCAGGTTCGAGGAGGCAGAAGACGACGCCGTTAGGCCAGGTGAAGGGAAACGGAAGTAGGACTGGCAGGAGACAGCGGCTGCAGCCAACGGCGACGTTTGACTACTTCTGA	1431	0.5597	MLDAPGSGRDSELSLEALSSTQRSSMSSESICSTSFSRLSFELLPTSPESLSLKPHRSSDFEYSAIRSATFRRKTGLTFRDFHLLRRIGAGDIGTVFLCRLRNSSYAEDDRFVTGTEDDVVVNREDDGCCLYAMKVVDKDAVALKNKSERAEMERKILKMLDHPFLPTLYAEFEASHFSCIVMEFCSGGDLHSLRHRQPQKRFPLSSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSMCSDAIPAVESSDLSPDPAFRDTVPCTRPHSNPFSCLPNRIFRSRKVQTLFPNRLFVAEPVSARSCSFVGTHEYVSPEVASGHSHGNAVDWWSFGIFIYELIYGRTPFAAPTNEATLRGIIKKPLTFPTATPYSTLELHARDLIFNLLHKDPTRRLGSKRGAADVKKHAFFKGLNFALIRMMTPPEVPGSRRQKTTPLGQVKGNGSRTGRRQRLQPTATFDYF	476

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci11g0594	476	SUPERFAMILY	Protein kinase-like (PK-like)	59	441	IPR011009	-
	Prci11g0594	476	MobiDBLite	consensus disorder prediction	438	476	-	-
	Prci11g0594	476	FunFam	protein kinase PINOID	186	254	-	-
	Prci11g0594	476	Gene3D	Transferase(Phosphotransferase) domain 1	186	254	-	-
	Prci11g0594	476	ProSiteProfiles	Protein kinase domain profile.	82	424	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci11g0594	476	Pfam	Protein kinase domain	318	424	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci11g0594	476	Pfam	Protein kinase domain	115	254	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci11g0594	476	SMART	serkin_6	82	424	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci11g0594	476	MobiDBLite	consensus disorder prediction	1	21	-	-
	Prci11g0594	476	FunFam	serine/threonine-protein kinase D6PK-like	316	442	-	-
	Prci11g0594	476	Gene3D	Transferase(Phosphotransferase) domain 1	317	442	-	-
	Prci11g0594	476	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	227	239	IPR008271	GO:0004672\|GO:0006468
	Prci11g0594	476	MobiDBLite	consensus disorder prediction	442	468	-	-
	Prci11g0594	476	FunFam	protein kinase PINOID 2	80	185	-	-
	Prci11g0594	476	Gene3D	Phosphorylase Kinase; domain 1	80	185	-	-
	Prci11g0594	476	PANTHER	FLIPPASE KINASE 1-RELATED	22	444	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci11g0594	Prci-Chr11	5896341	5898881	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci11g0594	10	476	AGC Kinase Gene Family	AT2G34650	63.559	0.0	568

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC_RSK-2	Prci11g0594		Pkinase	4.1e-30	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci11g0594	-		-	vun:114177159	671.003