Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0574 ATGAACCATAGCACCCAACCCAACACAGGATTTTTCACACTCCAAGGAGAAAAGCGAGTTCTGGATTCTGAGCTTTGGCATGCCTGCGCTGGCCCTCTTGTTTCCCTGCCAGCTGTTGGAAGCCGCGTCGTCTATTTCCCCCAGGGTCATAGTGAACAGGTTGCTGCATCAACTAACAAGGAGGTGGACGTCCATATTCCCAACTACCCAAGCTTACCTCCCCAACTTATTTGTCAACTTCATAATGTGACTATGCATGCTGATTCAGAGACTGATGAAGTGTATGCTCAGATGACCTTGCAACCTCTGAATCCTCAAGAACAAAAGGAGGCATACCTTCCAGCAGAGTTGGGAACTTCCAGTAAGCAACCAACAAATTACTTCTGCAAAACTTTGACTGCTAGCGACACAAGCACTCATGGGGGATTCTCTGTTCCTCGTCGGGCTGCTGAGAAAGTGTTTCCTCCATTGGATTTCTCTCAGCAGCCTCCTGCACAAGAATTAATTGCACGGGACTTGCATGGCAATGAATGGAAATTCAGACATATCTTCCGGGGCCAGCCTAAAAGACATCTACTTACAACAGGGTGGAGTGTCTTTGTAAGTGCTAAAAGGCTTGTTGCTGGTGATTCCGTGCTGTTTATTTGGAATGAAAAGAATCAATTGCTTCTTGGTATTCGACATGCAAATCGACCACAAACTGTGATGCCATCATCAGTGCTTTCAAGTGATAGCATGCACCTGGGGCTTCTTGCTGCTGCAGCGCATGCAGCTGCAACAAACAGCCGTTTCACCATTTTCTATAACCCACGTGCCAGCCCATCAGAATTTGTCATACCCTTAGCAAAGTATGTCAAAGCTGTGTATCATACCCGAGTTTCAGTTGGTATGCGTTTCCGGATGTTGTTTGAAACAGAGGAATCAAGTGTCCGGCGATACATGGGCACAATCACTGGCATCAGTGACCTGGATCCTGTTAGGTGGCCAAATTCACATTGGCGATCAGTTAAGGTTGGCTGGGATGAGTCCACAGCTGGAGATAGGCAACCTAGAGTGTCCTTGTGGGAGATTGAGCCGTTAACAACATTTCCAATGTATCCTTCCCCATTCCCTCTTAGGCTTAAACGACCATGGCCTCCCGGACTGCCTTCTTTCCACGGTATGAAGGATGATGATTTGGGTATCAATTCTCCGCTTTTGTGGGATAGAGGGCTTCATTCTCTTAATTTTCCAGGAATTGGGGTTACTCCTTGGATGCAGCCAAGGTTTGATCCCTCCTTTCTGAATTTGCAAACTGACATGTACCAAGCCATGGCTGCTGCTGCCCTTCAGGATATAAGGACTATAGATCCTTCCAAGCAGCATTCAACATCCCTTCTTCAATTTCAGCAACCACAGAACTACCCCAACCGGACTGCTGCTTTAGTGCAGGCCCAGATGCTGCAGCAGTCTCAACCTCAGCAAGCTTTCCAAAATAACCAAGAGAATTTGCATCCATCTCAACCTGAGCCTCTAAGTCAGACTCATCTTCAGCATCAACACTCTTTTGTTAATCAGCATCAGCCGCAGCAACATCAACAGCAAAGTTTTTCTGATCAGCAGATTTCAAATACTGTGTCTACAATGTCTCAGTTTGTTTCGGCACCTCAACCTCAGTCGCCACCAGGGCAAGCTATTTCTTCATTTTGCCATCAGCAAAGTTTTTCTGATTCAAATGGGAACAGTGTAACTACTGCAATGGTTTCTCCCCTGCATAGTATTTTGGGTTCATTTCCCCAAGAAGAAACTTCCCACCTTCCTAATATCCCTAGGACAAGCTCTTGGATACCTGTTCAACCTTCTACTGCTACTGCTACTTGGCCTTCTAAGCGTGTTGCTGTCGACCCTCTCCTTTCTTCTGGAGCTTCTCAATGTGATCTGCCTCACATGGATCAGTTAGGGCAGCGCCAGAATACATTGTCTCATAATGCAATTACTTTGCCACCCTTTCCTGGAAGGGAGTGCTCGATTGACCATGAAGGGAGTGCTGATCCACAAAACCATCTTTTATTTGGTGTCAATATTGAGCCCTCATCTCTTCTAGCACAGAACGGGATGTCAAGCCTTAAGGGCATCAGCAGCAACTGTGATTCCACAACCATACCTTTTCAGTCGTCCAATTACCTGGGTACTACAGGCACTGAGTCTACATTGAATCCTGCGATGTCGCAAACCATTGGTGAATCAGGATTCTTACCGGTCCCAGAGAATATGGGCCAAGGAAACTCCCCAAATAAAACCTTCGTAAAGGTTCACAAGTCAGGGTCCTTTGGAAGATCATTGGATATCACTAAATTCAGCAGCTACCATGAGCTGCGCCGTGAGCTTGCTCGTATGTTTGGCCTTGAAGGTGAATTGGAGGACCCTGTAAGATCAGGCTGGCAGCTTGTATTTGTTGACCGAGAGAATGATGTTCTTCTCCTTGGTGATGGCCCTTGGCCGGAATTTGTCAACAGCGTATGGTGTATCAAGATACTATCCCCGCAAGAAGTGCAACAAATGGGCAATCCTGGCCTCGAGCTTCTGAGTTCAGTTCCGATTCAAAGGCTTTTCAATGGAGCATGCGAAGACTATGTGAACCGACAGGACCCAAGAAGTTCAAGCTCTGGGATCACAACTGTGGGGTCTCTTGACTACTGA 2679 0.4677 MNHSTQPNTGFFTLQGEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDVHIPNYPSLPPQLICQLHNVTMHADSETDEVYAQMTLQPLNPQEQKEAYLPAELGTSSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRHANRPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGDRQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPPGLPSFHGMKDDDLGINSPLLWDRGLHSLNFPGIGVTPWMQPRFDPSFLNLQTDMYQAMAAAALQDIRTIDPSKQHSTSLLQFQQPQNYPNRTAALVQAQMLQQSQPQQAFQNNQENLHPSQPEPLSQTHLQHQHSFVNQHQPQQHQQQSFSDQQISNTVSTMSQFVSAPQPQSPPGQAISSFCHQQSFSDSNGNSVTTAMVSPLHSILGSFPQEETSHLPNIPRTSSWIPVQPSTATATWPSKRVAVDPLLSSGASQCDLPHMDQLGQRQNTLSHNAITLPPFPGRECSIDHEGSADPQNHLLFGVNIEPSSLLAQNGMSSLKGISSNCDSTTIPFQSSNYLGTTGTESTLNPAMSQTIGESGFLPVPENMGQGNSPNKTFVKVHKSGSFGRSLDITKFSSYHELRRELARMFGLEGELEDPVRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPQEVQQMGNPGLELLSSVPIQRLFNGACEDYVNRQDPRSSSSGITTVGSLDY 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0574 892 Pfam Auxin response factor 254 337 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Prci11g0574 892 FunFam Auxin response factor 754 848 - -
Prci11g0574 892 FunFam Auxin response factor 126 230 - -
Prci11g0574 892 ProSiteProfiles B3 DNA-binding domain profile. 128 230 IPR003340 GO:0003677
Prci11g0574 892 MobiDBLite consensus disorder prediction 479 534 - -
Prci11g0574 892 CDD B3_DNA 127 220 IPR003340 GO:0003677
Prci11g0574 892 Gene3D - 292 364 - -
Prci11g0574 892 SUPERFAMILY CAD & PB1 domains 751 834 - -
Prci11g0574 892 MobiDBLite consensus disorder prediction 542 561 - -
Prci11g0574 892 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 18 848 IPR044835 GO:0003677|GO:0006355|GO:0009725
Prci11g0574 892 SMART B3_2 128 230 IPR003340 GO:0003677
Prci11g0574 892 Gene3D - 755 848 - -
Prci11g0574 892 Gene3D - 126 229 IPR015300 -
Prci11g0574 892 Pfam AUX/IAA family 753 844 IPR033389 -
Prci11g0574 892 FunFam Auxin response factor 292 364 - -
Prci11g0574 892 SUPERFAMILY DNA-binding pseudobarrel domain 113 257 IPR015300 -
Prci11g0574 892 Pfam B3 DNA binding domain 128 229 IPR003340 GO:0003677
Prci11g0574 892 ProSiteProfiles PB1 domain profile. 759 843 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0574 Prci-Chr11 5715017 5721569 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0574 14 480 B3 DNA Binding Superfamily AT1G30330 87.021 0.0 833
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Prci11g0574 AUX_IAA 9.8e-07 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0574 - - gmx:100796447 1461.82