Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0573 ATGCCTAAACAAATCCACGAGATTAAGGATTTCCTTCTCACTGCAAGAAGGAAGGATGCAAGATCTGTGAAAATCATGAGGAGCAGGGATGTTGTGAAGTTCAAGGTCCGATGCTCCAAGTACTTGTACACACTTTGTGTGTCTGACCCAGAGAAGGCTGATAAGTTGAAGCAATCACTTCCTCCAGGTTTGAGCGTTCAAGATCTGTAA 210 0.4381 MPKQIHEIKDFLLTARRKDARSVKIMRSRDVVKFKVRCSKYLYTLCVSDPEKADKLKQSLPPGLSVQDL 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0573 69 Gene3D - 1 69 IPR038464 -
Prci11g0573 69 Pfam Ribosomal L38e protein family 2 68 IPR002675 GO:0003735|GO:0005840|GO:0006412
Prci11g0573 69 PANTHER 60S RIBOSOMAL PROTEIN L38 1 68 IPR002675 GO:0003735|GO:0005840|GO:0006412
Prci11g0573 69 FunFam 60S ribosomal protein L38 1 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0573 Prci-Chr11 5708861 5710582 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0573 1 69 Cytoplasmic Ribosomal Protein Gene Family AT3G59540 91.304 1.13e-41 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0573 K02923 - oeu:111367349 136.346