Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0560 ATGGCTCCCGCCGGAGCCACTTCCCTTCACTCTTCCCTCTGCAGCTTCTCTTCTCACAAACCGTCGCCTCCAAATTCCCAGCAGCCAAACACCCAATTGGGTCCCAAACCCAAAAGCCTCCTCCAAAAGCACCCACTCTATACTCCAACCCACACCAGACTCTCCCTTGAATTCAAAGAGAAAATTCTCTGCCTTGAAATTATGGGTGTTGATTCAGGCAAGGCCCTTTCAGTAAACCCTGATCTCAGAACTGCCACTATGGAATCCATCCATTCCATCATCTCCTTCCTTCACTCCAAAGGCATCCAACAGAATGACTTGCCCAGAATTCTGGGCATGTGCCCTAAGATTCTCACCTCCAGCATCAAATCTGAGCTTAGCCCAGTTTTTGATTTTCTCTCCCACGAACTTCAAGTCCCAGATCGCAGCTTCAGAAAGGTCATTAACAAATGCCCAAGATTGCTCACTTCAAGTGTCAAAGACCAGCTCAAGCCAGCTTTGTTCTACCTTCAGAGGCTAGGGTTCAAGGATTTGTTAGCCCTGGCTTATCAAGATTCTGTCTTGCTGGTTTCTAATGTGGAAAGGACTCTAATTCCTAAACTGAAGTTCTTGGAGAATCTGGGTTTTTCAAAGGAAGAAACTAAAGATATGGTCCTGAGGTGTCCTGCATTGTTGACCTTCAGCATTGACAATAACTTTCAGCCCAAGTTTGAGTATTTTTCTGGGGAAATGGGAAGAAAGCTGGAGGAGCTGAAAGAGTTTCCTCAGTATTTTGCTTTTAGCTTGGAAAACAGGATAAAGCCTAGGCATATGGAGGTTGTGCAAAGTGGGATCAATATGCCTTTGTCTTTGATGCTTAAGAGCACTGACGATGAGTTTAGGGAGCTCATGAAGCAGAAAACTGAATGA 909 0.4532 MAPAGATSLHSSLCSFSSHKPSPPNSQQPNTQLGPKPKSLLQKHPLYTPTHTRLSLEFKEKILCLEIMGVDSGKALSVNPDLRTATMESIHSIISFLHSKGIQQNDLPRILGMCPKILTSSIKSELSPVFDFLSHELQVPDRSFRKVINKCPRLLTSSVKDQLKPALFYLQRLGFKDLLALAYQDSVLLVSNVERTLIPKLKFLENLGFSKEETKDMVLRCPALLTFSIDNNFQPKFEYFSGEMGRKLEELKEFPQYFAFSLENRIKPRHMEVVQSGINMPLSLMLKSTDDEFRELMKQKTE 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0560 302 Gene3D Transcription termination factor 3, mitochondrial 135 301 IPR038538 -
Prci11g0560 302 FunFam Transcription termination factor MTEF1, chloroplastic 133 301 - -
Prci11g0560 302 MobiDBLite consensus disorder prediction 8 37 - -
Prci11g0560 302 MobiDBLite consensus disorder prediction 1 43 - -
Prci11g0560 302 PANTHER CGI-12 PROTEIN-RELATED 29 296 IPR003690 GO:0003690|GO:0006355
Prci11g0560 302 SMART mt_12 108 140 IPR003690 GO:0003690|GO:0006355
Prci11g0560 302 SMART mt_12 215 247 IPR003690 GO:0003690|GO:0006355
Prci11g0560 302 SMART mt_12 248 279 IPR003690 GO:0003690|GO:0006355
Prci11g0560 302 SMART mt_12 145 176 IPR003690 GO:0003690|GO:0006355
Prci11g0560 302 SMART mt_12 179 210 IPR003690 GO:0003690|GO:0006355
Prci11g0560 302 SMART mt_12 73 103 IPR003690 GO:0003690|GO:0006355
Prci11g0560 302 Pfam mTERF 188 293 IPR003690 GO:0003690|GO:0006355
Prci11g0560 302 Pfam mTERF 65 177 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0560 Prci-Chr11 5669362 5670502 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Prci11g0560 mTERF 7.2e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0560 K15031 - gmx:100788221 456.447