Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0558 ATGTCGTCTCGTACCGGAAGTTCTGGCGGCAAGACCCGCGCGGGAAAGTTCGAGCTGGGTCGGACACTGGGTGAGGGCAATTTCGCCAAGGTAAAGCTTGCCTGGAATGTCGAGACCGGAGAGAATGTGGCCATTAAAATTCTTGACAAGGACAAGATTCTCAAACACAAAATGATTCGCCAGGCAAGCAAGGGCAGGTTAAAAGAAGATGAAGCAAGAAAATATTTCCAGCAGCTTATATGTGCTGTGGATTACTGTCACAGTAGAGGTGTTTGCCACAGGGATCTAAAGCCTGAAAATTTGTTGCTGGATGCTAATGGAGTTCTTAAAGTTTCAGATTTTGGATTGAGTGCACTGCCTCAACAGCTTCGAGAAGATGGGTTGCTTCACACAACATGTGGTACACCAAATTATGTTGCCCCAGAGGTGATCCACAACAAAGGCTATGATGGTACGAAGGCAGATCTATGGTCATGTGGTGTTATTCTTTTTGTTTTGATGGCTGGCTACTTGCCCTTTGAAGATACTAATATTATGTCTTTATACAAAAAGATCTTCAAGGCTGATTTCACATGTCCTCCATGGTTCTCATCAAGTGCAAAGAAAATAATCAAGAGAATTCTTGATCCCAATCCTGCTACACGAATAACAATTGCTGAGGTCATTGAGAATGATTGGTTTAAGAAGGGATATGTGCCTCCTAGGTTCAAGCAAGCTGATGTTAGTCTTGATGATGTAGATGCTATATTCAGTGAATCAGCGGATTCTCAAAATTTTGTTGATGAGAGGCGAGAAGAGGCACCAGTGGCTGTGGCACCTATGGCTATGAATGCTTTTGAACTTATCTCTACATCTAAAGGCCTTAACCTTGGTAGCCTTTTCGAGAAACAAATGGGCCTTGTTAAAAGGGAAACAAGATTCACATCCAAATGTCCAGCGAATGAAATAATTTCAAAAATTGAGCAAACTGCAACGCCTCTGGGTTTTGATGTTAGGAAGAATAACTACAAGTTAAAGCTTCAAGGGGAAAAGAGCGGACGCAAAGGACATCTATCTGTCTCGACTGAGATATTTGAGGTGGCCCCTTCAATTTGCATGGTTGAGCTTCGCAAGTCTGGAGGAGATACTCTGGAATTTCATAAGTTCTACAAGAACCTATCTACCGGGCTGAAGGATGTCGTTTGGAAAGCAGAACCTATAGATGAAGAAACAAATGGTGCTGCTGCGTCGAGATAG 1236 0.4296 MSSRTGSSGGKTRAGKFELGRTLGEGNFAKVKLAWNVETGENVAIKILDKDKILKHKMIRQASKGRLKEDEARKYFQQLICAVDYCHSRGVCHRDLKPENLLLDANGVLKVSDFGLSALPQQLREDGLLHTTCGTPNYVAPEVIHNKGYDGTKADLWSCGVILFVLMAGYLPFEDTNIMSLYKKIFKADFTCPPWFSSSAKKIIKRILDPNPATRITIAEVIENDWFKKGYVPPRFKQADVSLDDVDAIFSESADSQNFVDERREEAPVAVAPMAMNAFELISTSKGLNLGSLFEKQMGLVKRETRFTSKCPANEIISKIEQTATPLGFDVRKNNYKLKLQGEKSGRKGHLSVSTEIFEVAPSICMVELRKSGGDTLEFHKFYKNLSTGLKDVVWKAEPIDEETNGAAASR 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0558 411 FunFam Non-specific serine/threonine protein kinase 54 234 - -
Prci11g0558 411 SMART serkin_6 17 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g0558 411 ProSiteProfiles NAF domain profile. 271 295 IPR018451 GO:0007165
Prci11g0558 411 ProSiteProfiles Protein kinase domain profile. 1 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g0558 411 FunFam Non-specific serine/threonine protein kinase 270 396 - -
Prci11g0558 411 ProSitePatterns Serine/Threonine protein kinases active-site signature. 91 103 IPR008271 GO:0004672|GO:0006468
Prci11g0558 411 Gene3D Transferase(Phosphotransferase) domain 1 10 58 - -
Prci11g0558 411 Gene3D Transferase(Phosphotransferase) domain 1 59 274 - -
Prci11g0558 411 Pfam NAF domain 273 333 IPR004041 GO:0007165
Prci11g0558 411 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 12 58 - -
Prci11g0558 411 CDD CIPK_C 277 392 - -
Prci11g0558 411 ProSitePatterns Protein kinases ATP-binding region signature. 23 46 IPR017441 GO:0005524
Prci11g0558 411 Gene3D Kinase associated domain 1, KA1 275 396 - -
Prci11g0558 411 Pfam Protein kinase domain 59 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g0558 411 SUPERFAMILY Protein kinase-like (PK-like) 14 239 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0558 Prci-Chr11 5646569 5654426 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0558 62 411 CBL-interacting serine-threonine protein kinases AT1G30270 79.387 0.0 596
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Prci11g0558 Pkinase 4.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0558 - - zju:107414012 665.225