Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0557 ATGTCGTCTCGTACCGGAAGTTCTGGCGGCAAGACCCGCGCGGGAAAGTTCGAGCTGGGTCGGACACTGGGTGAGGGCAATTTCGCCAAGGTAAAGCTTGCCTGGAATGTCGAGACCGGAGAGAATGTGGCCATTAAAATTCTTGACAAGGACAAGATTCTCAAACACAAAATGATTCGCCAGATAAAGCAAGAGATTTCGACAATGAAATTGATTAGGCACCCAAATGTCATACGCATGTATGAGGTTATGGCTAGCAAGACAAAGATATATATTGTACTCGAATTTGTGACTGGTGGGGAATTGTTTGATAAAATTGCAAGCAAGGGCAGGTTAAAAGAAGATGAAGCAAGAAAATATTTCCAGCAGCTTATATGTGCTGTGGATTACTGTCACAGTAGAGGTGTTTGCCACAGGGATCTAAAGCCTGAAAATTTGTTGCTGGATGCTAATGGAGTTCTTAAAGTTTCAGATTTTGGATTGAGTGCACTGCCTCAACAGCTTCGAGAAGATGGGTTGCTTCACACAACATGTGGTACACCAAATTATGTTGCCCCAGAGGTGATCCACAACAAAGGCTATGATGGTACGAAGGCAGATCTATGGTCATGTGGTGTTATTCTTTTTGTTTTGATGGCTGGCTACTTGCCCTTTGAAGATACTAATATTATGTCTTTATACAAAAAGATCTTCAAGGCTGATTTCACATGTCCTCCATGGTTCTCATCAAGTGCAAAGAAAATAATCAAGAGAATTCTTGATCCCAATCCTGCTACACGAATAACAATTGCTGAGGTCATTGAGAATGATTGGTTTAAGAAGGGATATGTGCCTCCTAGGTTCAAGCAAGCTGATGTTAGTCTTGATGATGTAGATGCTATATTCAGTGAATCAGCGGATTCTCAAAATTTTGTTGATGAGAGGCGAGAAGAGGCACCAGTGGCTGTGGCACCTATGGCTATGAATGCTTTTGAACTTATCTCTACATCTAAAGGCCTTAACCTTGGTAGCCTTTTCGAGAAACAAATGGGCCTTGTTAAAAGGGAAACAAGATTCACATCCAAATGTCCAGCGAATGAAATAATTTCAAAAATTGAGCAAACTGCAACGCCTCTGGGTTTTGATGTTAGGAAGAATAACTACAAGTTAAAGCTTCAAGGGGAAAAGAGCGGACGCAAAGGACATCTATCTGTCTCGACTGAGATATTTGAGGTGGCCCCTTCAATTTGCATGGTTGAGCTTCGCAAGTCTGGAGGAGATACTCTGGAATTTCATAAGTTCTACAAGAACCTATCTACCGGGCTGAAGGATGTCGTTTGGAAAGCAGAACCTATAGATGAAGAAACAAATGGTGCTGCTGCGTCGAGATAG 1371 0.4216 MSSRTGSSGGKTRAGKFELGRTLGEGNFAKVKLAWNVETGENVAIKILDKDKILKHKMIRQIKQEISTMKLIRHPNVIRMYEVMASKTKIYIVLEFVTGGELFDKIASKGRLKEDEARKYFQQLICAVDYCHSRGVCHRDLKPENLLLDANGVLKVSDFGLSALPQQLREDGLLHTTCGTPNYVAPEVIHNKGYDGTKADLWSCGVILFVLMAGYLPFEDTNIMSLYKKIFKADFTCPPWFSSSAKKIIKRILDPNPATRITIAEVIENDWFKKGYVPPRFKQADVSLDDVDAIFSESADSQNFVDERREEAPVAVAPMAMNAFELISTSKGLNLGSLFEKQMGLVKRETRFTSKCPANEIISKIEQTATPLGFDVRKNNYKLKLQGEKSGRKGHLSVSTEIFEVAPSICMVELRKSGGDTLEFHKFYKNLSTGLKDVVWKAEPIDEETNGAAASR 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0557 456 Pfam Protein kinase domain 17 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g0557 456 FunFam Non-specific serine/threonine protein kinase 8 96 - -
Prci11g0557 456 CDD STKc_SnRK3 16 271 - -
Prci11g0557 456 Gene3D Phosphorylase Kinase; domain 1 6 96 - -
Prci11g0557 456 Pfam NAF domain 318 378 IPR004041 GO:0007165
Prci11g0557 456 SUPERFAMILY Protein kinase-like (PK-like) 14 284 IPR011009 -
Prci11g0557 456 ProSiteProfiles Protein kinase domain profile. 17 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g0557 456 FunFam Non-specific serine/threonine protein kinase 10 313 - -
Prci11g0557 456 Gene3D Transferase(Phosphotransferase) domain 1 97 277 - -
Prci11g0557 456 SMART serkin_6 17 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g0557 456 ProSitePatterns Protein kinases ATP-binding region signature. 23 46 IPR017441 GO:0005524
Prci11g0557 456 CDD CIPK_C 322 437 - -
Prci11g0557 456 Gene3D Kinase associated domain 1, KA1 316 441 - -
Prci11g0557 456 FunFam Non-specific serine/threonine protein kinase 315 441 - -
Prci11g0557 456 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 12 430 - -
Prci11g0557 456 ProSiteProfiles NAF domain profile. 316 340 IPR018451 GO:0007165
Prci11g0557 456 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0557 Prci-Chr11 5646568 5654426 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0557 2 448 CBL-interacting serine-threonine protein kinases AT1G01140 67.991 0.0 651
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Prci11g0557 Pkinase 3e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0557 - - zju:107414012 771.155