Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0544 ATGGAGGAGGATGGGATTCAAGCACAAGCGTGTAAATTCCCGAGAATTGAAAATGGAAGTGCGAGAAACAATTCCTCCAACAAGATAGGTTCCAATATTAATGAAGAAAATGGTGACCTCAGAAAAAGAAGTGGAGGAGGTAGTGATGGAAGCAGCAACCGATTCCACAGTTGGCAACACCACTCGTCTAGAATCGTTAGGGTTTCTCGTGCCTCCGGCGGGAAGGATCGGCACAGCAAGGTCATGACTTCCAAGGGTTTAAGAGACCGAAGGGTTCGGCTCTCTGTCACCACGGCGATCCAATTCTACGACCTTCAAGATCGTCTGGGTTACGATCAGCCCAGTAAAGCCGTGGAATGGCTAATCAAAGCAGCGTCTGATGCAATTTCTGAGCTCCCTTCTCTGAACAATACGTTCCCGGAGACGCCGAAGCAACCCAGCGATGAGAAGAGAGGAGGTGAGAAATGTATCGATTCAGCTGATGCAGACGGAGATGGTGAAGCTGGTTTCCATCAGCAACAGAATCAAAATAATCAAAGTCAGAATCTTTCCTTGTCGAAGTCTGCTTGTAGCAGCACGTCGGAGACGAGCAAGGGCTCCGGCTTGTCCCTCTCGAGGACAGAGATTCGAGTCAAGGCCCGCGAGAGGGCGAGGGAGAGAGCGGCGAAGGAGAAGGAGAAAGAGAATGATGAATCTTGCAATATTGCTCATCCTCAGAATAATAATGTCATCTCAATGGCTCAAACTTCTTTCACTGAGCTTCTCACCGGTGGGATAAACACTAGAGTTCCCGCCACTACTACTAGCCCCACCGGCTCCGCTCAACAGAATCATCATCGGAGTGACGAGGCTGATCTGTTCAACAAAGGAGCTAGGCATCAATGGAGTATAGCGCCCATGGACTACTTCGGCGCGGAGCTTCTGGGAGGTTCGTCTTCTTCAAGAACCCAGCATCATCAATCTTCCGGGTTTTCAGGGCAGATCCAACAGGGGAACAATCTTGTTCAGGCAATGTCGCTTGCACCTTTCGGAGTCCAAAGTGAAAACCACTCAGATCAGCTTCAGCATTTCTCGTTCATTCCCGACCATCTAATGCCGACAGTGGTCACGTCGTCGCAGACCCCCAGCGGAGGGGGCGGTGGAGGTAGTGGCGCCGGCAGCGAGTACAATCTTAACTTCACAATCTCTTCTTCTAATTCCGGCGGCCTTGCTGGTTTCAACAATAGTAGGGGGACCCTTCAGTCCAATTCTCCGTCTCTTCTGCCTCATCATCTTCAGAGGTTCTCACCTTTAGACGGATCGTCCAACTTTCCTTTCTTCATCGGAGCCGCCGCCGCTCCGGCCATGGAGAATCACAACAACAACCACCACCAGTTCTCGCCCGAATTAGATGGCCGCTTGCAACTCTGCTACGGCGACGGAAGCCGGCATTCAGACCAGAAGGGGAAGGGGAAGAACTGA 1461 0.5127 MEEDGIQAQACKFPRIENGSARNNSSNKIGSNINEENGDLRKRSGGGSDGSSNRFHSWQHHSSRIVRVSRASGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKAASDAISELPSLNNTFPETPKQPSDEKRGGEKCIDSADADGDGEAGFHQQQNQNNQSQNLSLSKSACSSTSETSKGSGLSLSRTEIRVKARERARERAAKEKEKENDESCNIAHPQNNNVISMAQTSFTELLTGGINTRVPATTTSPTGSAQQNHHRSDEADLFNKGARHQWSIAPMDYFGAELLGGSSSSRTQHHQSSGFSGQIQQGNNLVQAMSLAPFGVQSENHSDQLQHFSFIPDHLMPTVVTSSQTPSGGGGGGSGAGSEYNLNFTISSSNSGGLAGFNNSRGTLQSNSPSLLPHHLQRFSPLDGSSNFPFFIGAAAAPAMENHNNNHHQFSPELDGRLQLCYGDGSRHSDQKGKGKN 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0544 486 ProSiteProfiles R domain profile. 207 225 IPR017888 -
Prci11g0544 486 MobiDBLite consensus disorder prediction 1 86 - -
Prci11g0544 486 MobiDBLite consensus disorder prediction 208 233 - -
Prci11g0544 486 MobiDBLite consensus disorder prediction 133 237 - -
Prci11g0544 486 MobiDBLite consensus disorder prediction 70 86 - -
Prci11g0544 486 MobiDBLite consensus disorder prediction 18 34 - -
Prci11g0544 486 Coils Coil 211 231 - -
Prci11g0544 486 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 28 413 IPR005333 GO:0003700
Prci11g0544 486 MobiDBLite consensus disorder prediction 144 165 - -
Prci11g0544 486 ProSiteProfiles TCP domain profile. 74 132 IPR017887 -
Prci11g0544 486 MobiDBLite consensus disorder prediction 169 204 - -
Prci11g0544 486 Pfam TCP family transcription factor 73 227 IPR017887 -
Prci11g0544 486 MobiDBLite consensus disorder prediction 46 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0544 Prci-Chr11 5535761 5543876 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0544 53 486 TCP Transcription Factor Family AT4G18390 42.451 6.61e-78 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Prci11g0544 TCP 3e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0544 - - gmx:100787772 448.358