Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0532 ATGAGGAGAAATTGCAACCTAGAACTTCGTCTCTTTCCTTCTCACGATTCCGACCACCACGTCCACCACCATCCCATAATGGGTGAAGGGGATAAGAATCATGAGAGTGAGATGATGAGTCCAGAGGATGAAGGACAGCAACAGAAGCTCACCATTTTCTATGATGGCAAGGTTTGCGTTTCTGATGTCACCGACCTTCAGGCAAGGTGGATAATGAAGGAAGCGACGAAGGAGGTGGAGGAGAAAATGAAGAGATCCTTATCATCGTCAAGCTTGGGACAGAGTCAGATGTGTAGCCCTAACACTGCACTTTCCATGAAGAGATCTCTTCAACGCTTTCTTCAGAAGCGAAAGGATCGCATCCACGAATCATCTCCTTACCATCCTTAA 390 0.4667 MRRNCNLELRLFPSHDSDHHVHHHPIMGEGDKNHESEMMSPEDEGQQQKLTIFYDGKVCVSDVTDLQARWIMKEATKEVEEKMKRSLSSSSLGQSQMCSPNTALSMKRSLQRFLQKRKDRIHESSPYHP 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0532 129 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 22 128 IPR040390 -
Prci11g0532 129 MobiDBLite consensus disorder prediction 86 109 - -
Prci11g0532 129 Pfam Jas motif 107 127 IPR018467 -
Prci11g0532 129 ProSiteProfiles Tify domain profile. 43 77 IPR010399 -
Prci11g0532 129 SMART tify_2 43 77 IPR010399 -
Prci11g0532 129 MobiDBLite consensus disorder prediction 15 46 - -
Prci11g0532 129 MobiDBLite consensus disorder prediction 82 129 - -
Prci11g0532 129 MobiDBLite consensus disorder prediction 15 42 - -
Prci11g0532 129 Pfam tify domain 45 73 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0532 Prci-Chr11 5466922 5468945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0532 1 128 Tify Gene Family AT1G30135 43.704 1.74e-26 94.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Prci11g0532 tify 2.9e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0532 - - jre:108990250 120.553