Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0514 ATGGGCGACGCAATTTCTCCTGCCGGTCAGGTCCAACAAGCTGCCGGCGTGGGAATTCTTCTTCAGATTGTGATGTTGGTTTTATCTTTCGTGCTCGGCCACATTCTTCGTCGCAAGAAGATATACGTCATTCCTGAAGCCAGTGCTTCTCTTCTCATAGGATTAATCGTTGGAGGGGTAGCTAACATTTTTAAGATAGAGAATGGCATTATCAGGGCGTGGTTCAATTTTCATGAGGAATTTTTTTTCTTGTTCCTGTTACCTCCCATAATATTTCAGTCTGGGTTCAGTCTCTCACCTAAACCTTTCTTCTTAAATTTTGGAGCTATTGTGACATTTGCTATATTCGGTACTTTTATAGCTTCAATAGTAACGGGTATTCTAGTTTATCTTGGCGGACAGATCCACCTCATGTATAAACTACCATTTGTTGAGTGCATAATGTTTGGTGCTCTTATATCAGCAACTGATCCTGTTACTGTTTTGTCCATATTTCAGGAGCTTGGCACAGATGTTAACCTATATGCCTTGGTTTTTGGAGAATCTGTTTTAAATGATGCAATGGCAATTTCCTTGTACAGGACGGCGTCATTGGTTAAAACTCACCCATCTGGACCAAATTTCTTCATGATAGTTGTTAGTTTTGTGGAATTCTTTGTTGGCTCAATGTCTGCAGGCGTTGGAGTTGGTTTTATATCTGCTTTGCTATTTAAGCATGCAGGGCTGGATATTTACAATCTTCAGAACTTGGAGAGCTGTCTTTTTGTTCTCTTCCCTTATTTCTCGTACATGCTTGCAGAAGGTCTTGGCATGTCTGGGATCGTATCAATATTGTTCGCGGGAATACTCATGAAGCGCTACACATATTCAAATTTGTCCACAAGTTCTCAAAGATTCGTCTCCTCATTTTTTGAGTTAATATCATCTTTGGCAGAGACATTTGTATTTATATACATGGGCCTTAATATTGCAATGGAGAAACATCGTTGGTCACATGTTGGATTTATATTCTTCTCAATTATATTCATTGGGGTTGCAAGGGCAGCAAATGTCTTTTCCTGTGTCTTTCTGGTCAACCTCGTCAGACCTGCTCATCAAAAGATTCCTCCAAATCATCAGAAAGCACTTTGGTATAGTGGACTTCGAGGGGCAATGGCCTTTGCCCTTGCTCTGCAATCATTTCATGATCTTCCAGAAGGACATGGTCAGACCATATTTACTGCTACTACTGCAATAATTATTTTGACGGTGTTATTGACTGGTGGATCAACGAGTTACATGCTGGGAGCTCTGGAAGTTGTAGGTGATAGCAATAAAATTGATAGTCCTCTGGGCTCTGAAGAAACCGTGAATTTTAAAGACAACAATAGTGATCCTGTTTCTTCTCACAATGAAGAGTCATCATCAGGGAACAAATTCAGGGTAAGGCTAGAAGGACTCCGCAACAGTGCCGTATCTCTTACAGCTTTAGATAGAAACTACCTCACTCCATTCTTTACAAGTCAAAGCGAAGACGAAGCAGATGCCAAACTTTTGACTGCTAGTAGAAGTCACAGAGCAGGCTTCCATGACGATAACCATGATTCTCCATGA 1593 0.408 MGDAISPAGQVQQAAGVGILLQIVMLVLSFVLGHILRRKKIYVIPEASASLLIGLIVGGVANIFKIENGIIRAWFNFHEEFFFLFLLPPIIFQSGFSLSPKPFFLNFGAIVTFAIFGTFIASIVTGILVYLGGQIHLMYKLPFVECIMFGALISATDPVTVLSIFQELGTDVNLYALVFGESVLNDAMAISLYRTASLVKTHPSGPNFFMIVVSFVEFFVGSMSAGVGVGFISALLFKHAGLDIYNLQNLESCLFVLFPYFSYMLAEGLGMSGIVSILFAGILMKRYTYSNLSTSSQRFVSSFFELISSLAETFVFIYMGLNIAMEKHRWSHVGFIFFSIIFIGVARAANVFSCVFLVNLVRPAHQKIPPNHQKALWYSGLRGAMAFALALQSFHDLPEGHGQTIFTATTAIIILTVLLTGGSTSYMLGALEVVGDSNKIDSPLGSEETVNFKDNNSDPVSSHNEESSSGNKFRVRLEGLRNSAVSLTALDRNYLTPFFTSQSEDEADAKLLTASRSHRAGFHDDNHDSP 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0514 530 MobiDBLite consensus disorder prediction 444 473 - -
Prci11g0514 530 MobiDBLite consensus disorder prediction 444 468 - -
Prci11g0514 530 MobiDBLite consensus disorder prediction 510 530 - -
Prci11g0514 530 Pfam Sodium/hydrogen exchanger family 24 428 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Prci11g0514 530 Gene3D - 143 195 - -
Prci11g0514 530 PANTHER SODIUM/HYDROGEN EXCHANGER 11 513 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Prci11g0514 530 NCBIfam sodium/hydrogen exchanger 3 24 442 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Prci11g0514 530 PRINTS Na+/H+ exchanger signature 95 109 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Prci11g0514 530 PRINTS Na+/H+ exchanger signature 110 118 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Prci11g0514 530 PRINTS Na+/H+ exchanger signature 81 92 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Prci11g0514 530 PRINTS Na+/H+ exchanger signature 150 160 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0514 Prci-Chr11 5302652 5309199 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0514 12 463 Antiporters AT3G05030 31.924 5.84e-53 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0514 K14724 - gmx:100790830 742.265