Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0508 ATGTTTCCGAGACTAATACACCCTCATGAAAGCATAATCGAAGACTTGGACGGTGCTTCGAACCACAACAATCACAAGGGCGACCCATGTCTGGTTTTGACCGCCGATCCCAAACCTCGCCTCCGATGGACCCAGGACCTCCATGAACGATTTGTCGATGCTGTCACCCAGCTTGGGGGTGCTAGTAAAGCTACGCCAAAAGCAATCATGCGGACCATGAATGTCAAGGGCTTGACTCTCTTTCATTTGAAAAGCCATCTTCAGAAATATAGACTTGGTAAACAATCAGGGAAAGATATGGTTGAAGGATGCAAAGATGGGATGCCAGGCTCGTATCTTTTAGAAAGCCCCAGTACTGATAACAACTCTCCAAAGTTACCAACTTCAGATACAAATGAGGGTCATGAGATCAAAGAGGCGTTAAGAATTCAGATGGAAGTGCAAAGCAAACTTCATTTGCAAGTAGAGGCAGAGAAGCACTTGCAGATTCGCCAAGATGCTGAGCAACGATACATGGCCATGCTTGAAAGAGCTTGCAAGATGCTGGCTGATCAATTTATCAGCGCGACAGTTATGGAGCCAAACAACCAAAAAGTTCAGGATCTTGGAAGTAAAGCACCAAGAGGTCCCCTGCTTGATTCTCTAGGATTTTACTCCTTACCGTCTGCCGAGGCAGCTGGAGTACATGTCCCAGAGGGAAAAATCATGCCTAGTTTCGAGCGGCCTAGGACTGGCTGTTCCACAGAAAGTTGCTTAACATCACATGAGAGTTCCACGGGGCTGGCTTCGGAAGGATCTCCAGATGGAGGTAAAAAGAGGATGCTGAGCTTGGACCCTATGGCAGCACCACCATTGATCTGGAGTGAACCCAAAATGAGAATTCAAGACATCAATATAACCCAAGATAATCTTCATGGAATAACTAGGTATGGCATGTAG 939 0.4643 MFPRLIHPHESIIEDLDGASNHNNHKGDPCLVLTADPKPRLRWTQDLHERFVDAVTQLGGASKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMVEGCKDGMPGSYLLESPSTDNNSPKLPTSDTNEGHEIKEALRIQMEVQSKLHLQVEAEKHLQIRQDAEQRYMAMLERACKMLADQFISATVMEPNNQKVQDLGSKAPRGPLLDSLGFYSLPSAEAAGVHVPEGKIMPSFERPRTGCSTESCLTSHESSTGLASEGSPDGGKKRMLSLDPMAAPPLIWSEPKMRIQDINITQDNLHGITRYGM 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0508 312 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 19 262 IPR044848 GO:0003700
Prci11g0508 312 FunFam Myb family transcription factor 37 95 - -
Prci11g0508 312 MobiDBLite consensus disorder prediction 114 130 - -
Prci11g0508 312 Pfam Myb-like DNA-binding domain 41 91 IPR001005 -
Prci11g0508 312 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 35 95 IPR017930 -
Prci11g0508 312 MobiDBLite consensus disorder prediction 236 276 - -
Prci11g0508 312 MobiDBLite consensus disorder prediction 243 264 - -
Prci11g0508 312 NCBIfam myb-like DNA-binding domain, SHAQKYF class 38 93 IPR006447 GO:0003677
Prci11g0508 312 Pfam MYB-CC type transfactor, LHEQLE motif 136 181 IPR025756 -
Prci11g0508 312 SUPERFAMILY Homeodomain-like 38 94 IPR009057 -
Prci11g0508 312 Gene3D - 37 95 - -
Prci11g0508 312 MobiDBLite consensus disorder prediction 109 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0508 Prci-Chr11 5241930 5246640 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0508 15 263 G2-like Transcription Factor Family AT3G24120 44.444 9.27e-65 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Prci11g0508 Myb_DNA-binding 5.3e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0508 - - gmx:100782369 478.404