Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0500 ATGGGTGAGAGGATGGCTCATGAATTGCTCTCTCTGCTTCTTCTTCTTCTTATCCTTCTCAACTACTTGTTGCTTTCATTTGCAGAATCACCAACCACAGCAAAAGAGGATGTGAATGCCCTCAATAGTCTGAAGAACTTAATGCAAAAAGTACCCCAAAGCTGGGAGAGTTCGGATCCTTGCAATGGCTGGGAGGGAATTACCTGCACCCAATCACGTATTACTTCCATAAAATTAGCAGGCATGGAGTTGAATGGCCAGATTTCTGCAGATTTTGGACTCCTCTCTGAATTAAAGACTCTGGATCTCTCTTACAATAAGAACCTAGAAGGACCATTTCCAAAAGCAATTGGAAATTTGAAGAAGCTGGAGGAATTATTTCTTGTGGGTTGTGGTTTCACTGGTCCTATTCCGGATGAAATTGGATCGTTACGAGAGCTTGTCTTTTTATCTATAAACTCTAACAGCTTTAGTGGAAGAATTCCAGCCTCCATTGGCAATCTATCAAAACTTGAATGGCTAGACTTGTCCGATAATCAGCTTGTTGGACCTATCCCAGTATCAAGTGGAGCTACTTCTGGTTTAGACATGCTACTTAATACACTGCACTTTCATCTTGGGAACAACAACCTATCAGGAGCTATTCCTCCGGAACTTTTCAGCTCAAATATGGCTCTGATACATTTGATCTTGAATGACAATAAACTTACTGGCAGCATTCCCAAAACACTTGGACGTGCTCAAAATCTAACGGTGGTGCGCTTGGAAAATAATTTTTTGACTGGCTTTGTACCTGAGAACCTGACAAACCTCCGCAATGTTACAGACCTGATATTGTCCAAAAATAATCTGTGGGGTACCATTCCAAACCTCAGTGGAATGACTGCCCTCCAGTATCTGGATATGAGCAACAATAACTTCGAGCCATCCGAATTTCCATCATGGCTTCAAAATTTACAATTTTTAAAATCACTAATAATGGAAAACACAAATCTTCGAGGGAAGATTCCTGCTGCATTTTTCAGTCTAGCCAATTTACGGACTGTGGTTCTGAAAGACAATGAACTCGGTGGAAGCTTGGACATTGGCACCAACTACAGCAAACAACTGAAACTGATTGATTTGCAGAATAATAGTATTGAGGATTTTAACAAACAAGATGAAGCCTCTGGGATCACAATAATACTTGTGGACAACGCTGCTTGCTATGAAACAGGCTCTGAAACAAGCACCCTCTGCACCATACAGAATAAACCACCTGCAGAGTCGCCCAAGAATTGTGTGCCCGATAGATGCAGTGTTCCAAATCAGATTTCTAGTCCCAATTGCAAATGCGCACAACCATATGAAGGAACTTTATCTTACAAAGCTCCTTCTTATATGACAAACGAAACTTACGTTGAGGAATATCTATTGGAAACATTCCGATCCCACCATCTACCTGTGGACTCTGTTTCTGTGATCACTCCAACTTGCTTTCCATTTCATTGTTTTAAATCCCTCATACGAATCTTCCCTTCAGACCAAGACCACTTCAATCAAACAATGATATCTGCAATAAGTCTGCTACTGAGTAACCTCACTACAATTCAAGCATATTCTTTTGTTCTTGGTCCTAATGACTATGGCAATGGACTTGAAAGTTCACGTAAATCATCAAACGCCAGCATCATAATTGGAGCTGCAGTTGGTGGTTCTGTGTTGCTTGCGCTATTTCTTCTAGCTGGTGTCTATGCTTTTTGCCAAACGATAAGAGCAGAAAAAGCAATTGAAGAAAGCGATCCATTTGGACACTGGGATGCGTGTGACAGCAGTGGCGCGAGACCTCAGTTACATGGAGCAAGGAGGTTCTCTCTCAAAGAACTTCAGGAATACACGAACAATTTTTCACAAGCAAATGAGATTGGATCTGGGGGTTATGGGAAGGTTTCTCGGGGAACTCTTCCCAATGGACAACTGGTTGCAATAAAACGAGCTCAGAAACAATCAAATCAAGGGGCACTTCAGTTTAAATCTGAAATTGAACTCCTTTCAAGAGTTCACCATAAGAATCTGGTCAGCCTTGTGGGATTCTGCTTCGAGCGAGGAGAACAAATCCTGGTTTATGAATTTGTCCCCAACGGAACCTTGAAGGATAGCATCTCAGGGAAGTCGGGTATAGTGTTGGACTGGACTAGAAGGTTAAAAGTAGCCCTTGGTTCTGCCAGGGGTTTGGTTTATCTTCATGAACATGCCAATCCTCCTGTTATACACAGGGACATTAAATCAACCAACATCTTGCTGGATGAACACTCGAATGCAAGAGTTGCTGATTTTGGTCTTTCCAAGCCTGTGGACAATTGTGAAAAAGATCACGTTACTACACAAGTTAAAGGAACAATGGGCTATTTGGATCCGGATTATTGCACAACTCAACAGTTGACTGAGAAAAGTGATGTCTATAGCTATGGAGTGGTATTGTTGGAGCTGTTAACTGCAAGAAAACCAATACAAGCAGGGAAACATATTGTGAAAGTATTTAGGAGTACAATTGATAAGACAAAAAGATTGTATGGCCTTCACGAAATTCTTGACCCAGCTCTTGACTTAGGATCCCCATTGAAGGGACTGGAGAACTTTGTTGATCTTGCAATGAAGTGTGTTGAGGATTCAGGAGCTGACAGACCGACAATGAGCGATGTGGTGAAAGAAATAGAACACTTGTTGAAGTCTGCTGGTCTGAACTCCACTGCTGAATCATCAGCATCTAATTCAGCTACCTTCGAGGAGTTAAGTAATGCGACTTCCCAAGTGTTCTCAACAGCACTGAGTCTCCGGATTCAAGTTCACTCGACAACGTCAGAAAGATTAAGCACAAGAGCCCAGGCAAACTGGTGGTTGAGACTTGATAGTGCGGTGATGGTGAATCTAATTCGGGGCGGCGGACAGAGGATTAGCAAGTGCAAGATCAATGGGGAAGATATCCAAGACTTGAGAAAAAGCAACTGTCATGTATGA 2997 0.4208 MGERMAHELLSLLLLLLILLNYLLLSFAESPTTAKEDVNALNSLKNLMQKVPQSWESSDPCNGWEGITCTQSRITSIKLAGMELNGQISADFGLLSELKTLDLSYNKNLEGPFPKAIGNLKKLEELFLVGCGFTGPIPDEIGSLRELVFLSINSNSFSGRIPASIGNLSKLEWLDLSDNQLVGPIPVSSGATSGLDMLLNTLHFHLGNNNLSGAIPPELFSSNMALIHLILNDNKLTGSIPKTLGRAQNLTVVRLENNFLTGFVPENLTNLRNVTDLILSKNNLWGTIPNLSGMTALQYLDMSNNNFEPSEFPSWLQNLQFLKSLIMENTNLRGKIPAAFFSLANLRTVVLKDNELGGSLDIGTNYSKQLKLIDLQNNSIEDFNKQDEASGITIILVDNAACYETGSETSTLCTIQNKPPAESPKNCVPDRCSVPNQISSPNCKCAQPYEGTLSYKAPSYMTNETYVEEYLLETFRSHHLPVDSVSVITPTCFPFHCFKSLIRIFPSDQDHFNQTMISAISLLLSNLTTIQAYSFVLGPNDYGNGLESSRKSSNASIIIGAAVGGSVLLALFLLAGVYAFCQTIRAEKAIEESDPFGHWDACDSSGARPQLHGARRFSLKELQEYTNNFSQANEIGSGGYGKVSRGTLPNGQLVAIKRAQKQSNQGALQFKSEIELLSRVHHKNLVSLVGFCFERGEQILVYEFVPNGTLKDSISGKSGIVLDWTRRLKVALGSARGLVYLHEHANPPVIHRDIKSTNILLDEHSNARVADFGLSKPVDNCEKDHVTTQVKGTMGYLDPDYCTTQQLTEKSDVYSYGVVLLELLTARKPIQAGKHIVKVFRSTIDKTKRLYGLHEILDPALDLGSPLKGLENFVDLAMKCVEDSGADRPTMSDVVKEIEHLLKSAGLNSTAESSASNSATFEELSNATSQVFSTALSLRIQVHSTTSERLSTRAQANWWLRLDSAVMVNLIRGGGQRISKCKINGEDIQDLRKSNCHV 998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0500 998 Pfam Leucine rich repeat 249 307 IPR001611 GO:0005515
Prci11g0500 998 PANTHER RECEPTOR-LIKE PROTEIN 55 45 900 - -
Prci11g0500 998 Gene3D Transferase(Phosphotransferase) domain 1 705 925 - -
Prci11g0500 998 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 705 915 - -
Prci11g0500 998 Pfam Leucine rich repeat N-terminal domain 34 69 IPR013210 -
Prci11g0500 998 SMART serkin_6 629 903 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g0500 998 CDD STKc_IRAK 635 901 - -
Prci11g0500 998 FunFam Leucine-rich repeat family protein 36 190 - -
Prci11g0500 998 Pfam Protein kinase domain 630 896 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g0500 998 Gene3D Ribonuclease Inhibitor 34 192 IPR032675 -
Prci11g0500 998 ProSiteProfiles Protein kinase domain profile. 629 902 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g0500 998 SUPERFAMILY Protein kinase-like (PK-like) 615 910 IPR011009 -
Prci11g0500 998 ProSitePatterns Protein kinases ATP-binding region signature. 635 657 IPR017441 GO:0005524
Prci11g0500 998 Gene3D Phosphorylase Kinase; domain 1 600 704 - -
Prci11g0500 998 SUPERFAMILY L domain-like 54 385 - -
Prci11g0500 998 FunFam Leucine-rich repeat protein kinase family protein 191 290 - -
Prci11g0500 998 ProSitePatterns Serine/Threonine protein kinases active-site signature. 749 761 IPR008271 GO:0004672|GO:0006468
Prci11g0500 998 Gene3D Ribonuclease Inhibitor 193 396 IPR032675 -
Prci11g0500 998 FunFam receptor-like protein kinase FERONIA 600 704 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0500 Prci-Chr11 5157048 5171587 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0500 15 923 Receptor kinase-like Gene Family AT5G49760 51.732 0.0 851
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Prci11g0500 Pkinase 4.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0500 - - gmx:100810323 1066.22