LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci11g0499	ATGGGTGAGAGGATGGCTCATGAATTGCTCTCTCTGCTTCTTCTTCTTCTTATCCTTCTCAACTACTTGTTGCTTTCATTTGCAGAATCACCAACCACAGCAAAAGAGGATGTGAATGCCCTCAATAGTCTGAAGAACTTAATGCAAAAAGTACCCCAAAGCTGGGAGAGTTCGGATCCTTGCAATGGCTGGGAGGGAATTACCTGCACCCAATCACGTATTACTTCCATAAAATTAGCAGGCATGGAGTTGAATGGCCAGATTTCTGCAGATTTTGGACTCCTCTCTGAATTAAAGACTCTGGATCTCTCTTACAATAAGAACCTAGAAGGACCATTTCCAAAAGCAATTGGAAATTTGAAGAAGCTGGAGGAATTATTTCTTGTGGGTTGTGGTTTCACTGGTCCTATTCCGGATGAAATTGGATCGTTACGAGAGCTTGTCTTTTTATCTATAAACTCTAACAGCTTTAGTGGAAGAATTCCAGCCTCCATTGGCAATCTATCAAAACTTGAATGGCTAGACTTGTCCGATAATCAGCTTGTTGGACCTATCCCAGTATCAAGTGGAGCTACTTCTGGTTTAGACATGCTACTTAATACACTGCACTTTCATCTTGGGAACAACAACCTATCAGGAGCTATTCCTCCGGAACTTTTCAGCTCAAATATGGCTCTGATACATTTGATCTTGAATGACAATAAACTTACTGGCAGCATTCCCAAAACACTTGGACGTGCTCAAAATCTAACGGTGGTGCGCTTGGAAAATAATTTTTTGACTGGCTTTGTACCTGAGAACCTGACAAACCTCCGCAATGTTACAGACCTGGATATGAGCAACAATAACTTCGAGCCATCCGAATTTCCATCATGGCTTCAAAATTTACAATTTTTAAAATCACTAATAATGGAAAACACAAATCTTCGAGGGAAGATTCCTGCTGCATTTTTCAGTCTAGCCAATTTACGGACTGTGGTTCTGAAAGACAATGAACTCGGTGGAAGCTTGGACATTGGCACCAACTACAGCAAACAACTGAAACTGATTGATTTGCAGAATAATAGTATTGAGGATTTTAACAAACAAGATGAAGCCTCTGGGATCACAATAATACTTGTGGACAACGCTGCTTGCTATGAAACAGGCTCTGAAACAAGCACCCTCTGCACCATACAGAATAAACCACCTGCAGAGTCGCCCAAGAATTGTGTGCCCGATAGATGCAGTGTTCCAAATCAGATTTCTAGTCCCAATTGCAAATGCGCACAACCATATGAAGGAACTTTATCTTACAAAGCTCCTTCTTATATGACAAACGAAACTTACGTTGAGGAATATCTATTGGAAACATTCCGATCCCACCATCTACCTGTGGACTCTGTTTCTGTGATCACTCCAACTTGCTTTCCATTTCATTGTTTTAAATCCCTCATACGAATCTTCCCTTCAGACCAAGACCACTTCAATCAAACAATGATATCTGCAATAAGTCTGCTACTGAGTAACCTCACTACAATTCAAGCATATTCTTTTGTTCTTGGTCCTAATGACTATGGCAATGGACTTGAAAGTTCACGTAAATCATCAAACGCCAGCATCATAATTGGAGCTGCAGTTGGTGGTTCTGTGTTGCTTGCGCTATTTCTTCTAGCTGGTGTCTATGCTTTTTGCCAAACGATAAGAGCAGAAAAAGCAATTGAAGAAAGCGATCCATTTGGACACTGGGATGCGTGTGACAGCAGTGGCGCGAGACCTCAGTTACATGGAGCAAGGAGGTTCTCTCTCAAAGAACTTCAGGAATACACGAACAATTTTTCACAAGCAAATGAGATTGGATCTGGGGGTTATGGGAAGGTTTCTCGGGGAACTCTTCCCAATGGACAACTGGTTGCAATAAAACGAGCTCAGAAACAATCAAATCAAGGGGCACTTCAGTTTAAATCTGAAATTGAACTCCTTTCAAGAGTTCACCATAAGAATCTGGTCAGCCTTGTGGGATTCTGCTTCGAGCGAGGAGAACAAATCCTGGTTTATGAATTTGTCCCCAACGGAACCTTGAAGGATAGCATCTCAGGGAAGTCGGGTATAGTGTTGGACTGGACTAGAAGGTTAAAAGTAGCCCTTGGTTCTGCCAGGGGTTTGGTTTATCTTCATGAACATGCCAATCCTCCTGTTATACACAGGGACATTAAATCAACCAACATCTTGCTGGATGAACACTCGAATGCAAGAGTTGCTGATTTTGGTCTTTCCAAGCCTGTGGACAATTGTGAAAAAGATCACGTTACTACACAAGTTAAAGGAACAATGGGCTATTTGGATCCGGATTATTGCACAACTCAACAGTTGACTGAGAAAAGTGATGTCTATAGCTATGGAGTGGTATTGTTGGAGCTGTTAACTGCAAGAAAACCAATACAAGCAGGGAAACATATTGTGAAAGTATTTAGGAGTACAATTGATAAGACAAAAAGATTGTATGGCCTTCACGAAATTCTTGACCCAGCTCTTGACTTAGGATCCCCATTGAAGGGACTGGAGAACTTTGTTGATCTTGCAATGAAGTGTGTTGAGGATTCAGGAGCTGACAGACCGACAATGAGCGATGTGGTGAAAGAAATAGAACACTTGTTGAAGTCTGCTGGTCTGAACTCCACTGCTGAATCATCAGCATCTAATTCAGCTACCTTCGAGGAGTTAAGTAATGCGACTTCCCAAGTGTTCTCAACAGCACTGAGTCTCCGGATTCAAGTTCACTCGACAACGTCAGAAAGATTAAGCACAAGAGCCCAGGCAAACTGGTGGTTGAGACTTGATAGTGCGGTGATGGTGAATCTAATTCGGGGCGGCGGACAGAGGATTAGCAAGTGCAAGATCAATGGGGAAGATATCCAAGACTTGAGAAAAAGCAACTGTCATGTATGA	2928	0.4204	MGERMAHELLSLLLLLLILLNYLLLSFAESPTTAKEDVNALNSLKNLMQKVPQSWESSDPCNGWEGITCTQSRITSIKLAGMELNGQISADFGLLSELKTLDLSYNKNLEGPFPKAIGNLKKLEELFLVGCGFTGPIPDEIGSLRELVFLSINSNSFSGRIPASIGNLSKLEWLDLSDNQLVGPIPVSSGATSGLDMLLNTLHFHLGNNNLSGAIPPELFSSNMALIHLILNDNKLTGSIPKTLGRAQNLTVVRLENNFLTGFVPENLTNLRNVTDLDMSNNNFEPSEFPSWLQNLQFLKSLIMENTNLRGKIPAAFFSLANLRTVVLKDNELGGSLDIGTNYSKQLKLIDLQNNSIEDFNKQDEASGITIILVDNAACYETGSETSTLCTIQNKPPAESPKNCVPDRCSVPNQISSPNCKCAQPYEGTLSYKAPSYMTNETYVEEYLLETFRSHHLPVDSVSVITPTCFPFHCFKSLIRIFPSDQDHFNQTMISAISLLLSNLTTIQAYSFVLGPNDYGNGLESSRKSSNASIIIGAAVGGSVLLALFLLAGVYAFCQTIRAEKAIEESDPFGHWDACDSSGARPQLHGARRFSLKELQEYTNNFSQANEIGSGGYGKVSRGTLPNGQLVAIKRAQKQSNQGALQFKSEIELLSRVHHKNLVSLVGFCFERGEQILVYEFVPNGTLKDSISGKSGIVLDWTRRLKVALGSARGLVYLHEHANPPVIHRDIKSTNILLDEHSNARVADFGLSKPVDNCEKDHVTTQVKGTMGYLDPDYCTTQQLTEKSDVYSYGVVLLELLTARKPIQAGKHIVKVFRSTIDKTKRLYGLHEILDPALDLGSPLKGLENFVDLAMKCVEDSGADRPTMSDVVKEIEHLLKSAGLNSTAESSASNSATFEELSNATSQVFSTALSLRIQVHSTTSERLSTRAQANWWLRLDSAVMVNLIRGGGQRISKCKINGEDIQDLRKSNCHV	975

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci11g0499	975	SMART	serkin_6	606	880	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci11g0499	975	Gene3D	Transferase(Phosphotransferase) domain 1	682	902	-	-
	Prci11g0499	975	ProSitePatterns	Protein kinases ATP-binding region signature.	612	634	IPR017441	GO:0005524
	Prci11g0499	975	Pfam	Leucine rich repeat N-terminal domain	34	69	IPR013210	-
	Prci11g0499	975	FunFam	LRR receptor-like serine/threonine-protein kinase HSL2	682	892	-	-
	Prci11g0499	975	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	726	738	IPR008271	GO:0004672\|GO:0006468
	Prci11g0499	975	CDD	STKc_IRAK	612	878	-	-
	Prci11g0499	975	PANTHER	RECEPTOR-LIKE PROTEIN 55	45	877	-	-
	Prci11g0499	975	Gene3D	Ribonuclease Inhibitor	34	193	IPR032675	-
	Prci11g0499	975	FunFam	Leucine-rich repeat protein kinase family protein	191	287	-	-
	Prci11g0499	975	SUPERFAMILY	L domain-like	53	367	-	-
	Prci11g0499	975	Pfam	Protein kinase domain	607	873	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci11g0499	975	Gene3D	Phosphorylase Kinase; domain 1	577	681	-	-
	Prci11g0499	975	FunFam	Leucine-rich repeat family protein	36	190	-	-
	Prci11g0499	975	FunFam	receptor-like protein kinase FERONIA	577	681	-	-
	Prci11g0499	975	ProSiteProfiles	Protein kinase domain profile.	606	879	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci11g0499	975	SUPERFAMILY	Protein kinase-like (PK-like)	592	887	IPR011009	-
	Prci11g0499	975	Gene3D	Ribonuclease Inhibitor	194	363	IPR032675	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci11g0499	Prci-Chr11	5157048	5171587	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci11g0499	15	900	Receptor kinase-like Gene Family	AT5G49760	50.649	0.0	832

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-VIII-1	Prci11g0499		Pkinase	4.7e-47	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci11g0499	-		-	gmx:100810323	1025.39