LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci11g0498	ATGGGTGAGAGGATGGCTCATGAATTGCTCTCTCTGCTTCTTCTTCTTCTTATCCTTCTCAACTACTTGTTGCTTTCATTTGCAGAATCACCAACCACAGCAAAAGAGGATGTGAATGCCCTCAATAGTCTGAAGAACTTAATGCAAAAAGTACCCCAAAGCTGGGAGAGTTCGGATCCTTGCAATGGCTGGGAGGGAATTACCTGCACCCAATCACGTATTACTTCCATAAAATTAGCAGGCATGGAGTTGAATGGCCAGATTTCTGCAGATTTTGGACTCCTCTCTGAATTAAAGACTCTGGATCTCTCTTACAATAAGAACCTAGAAGGACCATTTCCAAAAGCAATTGGAAATTTGAAGAAGCTGGAGGAATTATTTCTTGTGGGTTGTGGTTTCACTGGTCCTATTCCGGATGAAATTGGATCGTTACGAGAGCTTGTCTTTTTATCTATAAACTCTAACAGCTTTAGTGGAAGAATTCCAGCCTCCATTGGCAATCTATCAAAACTTGAATGGCTAGACTTGTCCGATAATCAGCTTGTTGGACCTATCCCAGTATCAAGTGGAGCTACTTCTGGTTTAGACATGCTACTTAATACACTGCACTTTCATCTTGGGAACAACAACCTATCAGGAGCTATTCCTCCGGAACTTTTCAGCTCAAATATGGCTCTGATACATTTGATCTTGAATGACAATAAACTTACTGGCAGCATTCCCAAAACACTTGGACGTGCTCAAAATCTAACGGTGGTGCGCTTGGAAAATAATTTTTTGACTGGCTTTGTACCTGAGAACCTGACAAACCTCCGCAATGTTACAGACCTAATAATGGAAAACACAAATCTTCGAGGGAAGATTCCTGCTGCATTTTTCAGTCTAGCCAATTTACGGACTGTGGTTCTGAAAGACAATGAACTCGGTGGAAGCTTGGACATTGGCACCAACTACAGCAAACAACTGAAACTGATTGATTTGCAGAATAATAGTATTGAGGATTTTAACAAACAAGATGAAGCCTCTGGGATCACAATAATACTTGTGGACAACGCTGCTTGCTATGAAACAGGCTCTGAAACAAGCACCCTCTGCACCATACAGAATAAACCACCTGCAGAGTCGCCCAAGAATTGTGTGCCCGATAGATGCAGTGTTCCAAATCAGATTTCTAGTCCCAATTGCAAATGCGCACAACCATATGAAGGAACTTTATCTTACAAAGCTCCTTCTTATATGACAAACGAAACTTACGTTGAGGAATATCTATTGGAAACATTCCGATCCCACCATCTACCTGTGGACTCTGTTTCTGTGATCACTCCAACTTGCTTTCCATTTCATTGTTTTAAATCCCTCATACGAATCTTCCCTTCAGACCAAGACCACTTCAATCAAACAATGATATCTGCAATAAGTCTGCTACTGAGTAACCTCACTACAATTCAAGCATATTCTTTTGTTCTTGGTCCTAATGACTATGGCAATGGACTTGAAAGTTCACGTAAATCATCAAACGCCAGCATCATAATTGGAGCTGCAGTTGGTGGTTCTGTGTTGCTTGCGCTATTTCTTCTAGCTGGTGTCTATGCTTTTTGCCAAACGATAAGAGCAGAAAAAGCAATTGAAGAAAGCGATCCATTTGGACACTGGGATGCGTGTGACAGCAGTGGCGCGAGACCTCAGTTACATGGAGCAAGGAGGTTCTCTCTCAAAGAACTTCAGGAATACACGAACAATTTTTCACAAGCAAATGAGATTGGATCTGGGGGTTATGGGAAGGTTTCTCGGGGAACTCTTCCCAATGGACAACTGGTTGCAATAAAACGAGCTCAGAAACAATCAAATCAAGGGGCACTTCAGTTTAAATCTGAAATTGAACTCCTTTCAAGAGTTCACCATAAGAATCTGGTCAGCCTTGTGGGATTCTGCTTCGAGCGAGGAGAACAAATCCTGGTTTATGAATTTGTCCCCAACGGAACCTTGAAGGATAGCATCTCAGGGAAGTCGGGTATAGTGTTGGACTGGACTAGAAGGTTAAAAGTAGCCCTTGGTTCTGCCAGGGGTTTGGTTTATCTTCATGAACATGCCAATCCTCCTGTTATACACAGGGACATTAAATCAACCAACATCTTGCTGGATGAACACTCGAATGCAAGAGTTGCTGATTTTGGTCTTTCCAAGCCTGTGGACAATTGTGAAAAAGATCACGTTACTACACAAGTTAAAGGAACAATGGGCTATTTGGATCCGGATTATTGCACAACTCAACAGTTGACTGAGAAAAGTGATGTCTATAGCTATGGAGTGGTATTGTTGGAGCTGTTAACTGCAAGAAAACCAATACAAGCAGGGAAACATATTGTGAAAGTATTTAGGAGTACAATTGATAAGACAAAAAGATTGTATGGCCTTCACGAAATTCTTGACCCAGCTCTTGACTTAGGATCCCCATTGAAGGGACTGGAGAACTTTGTTGATCTTGCAATGAAGTGTGTTGAGGATTCAGGAGCTGACAGACCGACAATGAGCGATGTGGTGAAAGAAATAGAACACTTGTTGAAGTCTGCTGGTCTGAACTCCACTGCTGAATCATCAGCATCTAATTCAGCTACCTTCGAGGAGTTAAGTAATGCGACTTCCCAAGTGTTCTCAACAGCACTGAGTCTCCGGATTCAAGTTCACTCGACAACGTCAGAAAGATTAAGCACAAGAGCCCAGGCAAACTGGTGGTTGAGACTTGATAGTGCGGTGATGGTGAATCTAATTCGGGGCGGCGGACAGAGGATTAGCAAGTGCAAGATCAATGGGGAAGATATCCAAGACTTGAGAAAAAGCAACTGTCATGTATGA	2853	0.4227	MGERMAHELLSLLLLLLILLNYLLLSFAESPTTAKEDVNALNSLKNLMQKVPQSWESSDPCNGWEGITCTQSRITSIKLAGMELNGQISADFGLLSELKTLDLSYNKNLEGPFPKAIGNLKKLEELFLVGCGFTGPIPDEIGSLRELVFLSINSNSFSGRIPASIGNLSKLEWLDLSDNQLVGPIPVSSGATSGLDMLLNTLHFHLGNNNLSGAIPPELFSSNMALIHLILNDNKLTGSIPKTLGRAQNLTVVRLENNFLTGFVPENLTNLRNVTDLIMENTNLRGKIPAAFFSLANLRTVVLKDNELGGSLDIGTNYSKQLKLIDLQNNSIEDFNKQDEASGITIILVDNAACYETGSETSTLCTIQNKPPAESPKNCVPDRCSVPNQISSPNCKCAQPYEGTLSYKAPSYMTNETYVEEYLLETFRSHHLPVDSVSVITPTCFPFHCFKSLIRIFPSDQDHFNQTMISAISLLLSNLTTIQAYSFVLGPNDYGNGLESSRKSSNASIIIGAAVGGSVLLALFLLAGVYAFCQTIRAEKAIEESDPFGHWDACDSSGARPQLHGARRFSLKELQEYTNNFSQANEIGSGGYGKVSRGTLPNGQLVAIKRAQKQSNQGALQFKSEIELLSRVHHKNLVSLVGFCFERGEQILVYEFVPNGTLKDSISGKSGIVLDWTRRLKVALGSARGLVYLHEHANPPVIHRDIKSTNILLDEHSNARVADFGLSKPVDNCEKDHVTTQVKGTMGYLDPDYCTTQQLTEKSDVYSYGVVLLELLTARKPIQAGKHIVKVFRSTIDKTKRLYGLHEILDPALDLGSPLKGLENFVDLAMKCVEDSGADRPTMSDVVKEIEHLLKSAGLNSTAESSASNSATFEELSNATSQVFSTALSLRIQVHSTTSERLSTRAQANWWLRLDSAVMVNLIRGGGQRISKCKINGEDIQDLRKSNCHV	950

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci11g0498	950	Gene3D	Ribonuclease Inhibitor	34	195	IPR032675	-
	Prci11g0498	950	Pfam	Leucine rich repeat N-terminal domain	34	69	IPR013210	-
	Prci11g0498	950	FunFam	receptor-like protein kinase FERONIA	552	656	-	-
	Prci11g0498	950	FunFam	LRR receptor-like serine/threonine-protein kinase HSL2	657	867	-	-
	Prci11g0498	950	PANTHER	RECEPTOR-LIKE PROTEIN 55	45	852	-	-
	Prci11g0498	950	Pfam	Protein kinase domain	582	848	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci11g0498	950	Gene3D	Transferase(Phosphotransferase) domain 1	657	877	-	-
	Prci11g0498	950	CDD	STKc_IRAK	587	853	-	-
	Prci11g0498	950	SMART	serkin_6	581	855	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci11g0498	950	ProSiteProfiles	Protein kinase domain profile.	581	854	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci11g0498	950	SUPERFAMILY	Protein kinase-like (PK-like)	567	862	IPR011009	-
	Prci11g0498	950	FunFam	Leucine-rich repeat protein kinase family protein	191	290	-	-
	Prci11g0498	950	Gene3D	Phosphorylase Kinase; domain 1	552	656	-	-
	Prci11g0498	950	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	701	713	IPR008271	GO:0004672\|GO:0006468
	Prci11g0498	950	Gene3D	Ribonuclease Inhibitor	196	336	IPR032675	-
	Prci11g0498	950	FunFam	Leucine-rich repeat family protein	36	190	-	-
	Prci11g0498	950	ProSitePatterns	Protein kinases ATP-binding region signature.	587	609	IPR017441	GO:0005524
	Prci11g0498	950	SUPERFAMILY	L domain-like	54	333	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci11g0498	Prci-Chr11	5157048	5171587	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci11g0498	15	875	Receptor kinase-like Gene Family	AT5G49760	49.459	0.0	799

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-VIII-1	Prci11g0498		Pkinase	4.4e-47	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci11g0498	-		-	gmx:100810323	984.556