Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g0495 ATGGGTGGAAGAATACTGGTATTCATCCTGCTTGTCTGCAATTATTTGCTGATTGCAGTAGCAGACACTGCTACTGAGGATTTGACCGCTCTCAAGTCTCTTATGGATACCTGGCAGAAGACACCTCCCAACTGGGTGGGATCAGATCCTTGTAATGGTTGGGATGGAATTAAGTGTACCAATTCACACGTTATTTCCATATCGTTATCAAGCACAGGTTTGGCAGGCCAACTTTCTGGATATATTGGATCACTATCTGAATTAGAGACCTTGGACTTAGCAGGACCACTTCCCCAAACCATTGGAAATTTGAAGAAGTTGTCAACCTTAATTCTTGTTGGCTGTAGTTTCAATGGTCCCATTCCAGAAGAAATAGGAAATCTGCAGGAGCTTCTATTCCTATCTTTAAATTCCAACAAGTTTGTTGGACATATTCCACCTTCTATTGGCAACCTATCTAACCTTTATTGGTTAGACTTAGCTGATAATCAGCTTGAAGGACCCATCCCTGTATCTAGTAGCAGTAAGCCTGGTCTTGATATGCTACATCATGCAAAGCATTTTCATTGTGGCAATAATAATCTCTCAGGACCCATTCCTCCTAAACTTTTCAGCTCGGAGATGAATTTGATTCATGTGCTTTTTGAAAATAATCAGCTCAGTGGAAGCATCCCCACTACACTTGGACTTGTTCAGAGTCTGGAGGTGGTGCGTCTTGATAGTAATTCTTTAAGTGGACTTGTGCCTCAAAACATCAGCAGCCTTGTGAAAGTTCAAGAGATGTACTTGTCCAACAATAAGCTTTCAGGATCCCTACCAAACCTTATTGGAATGAGTGTCCTCAGCTACATGGATGTCAGCAATAATAGCTTTACTTCATGGGATTTTCCATCATGGCTTTCAACTATGCAGTCTCTAACAACGTTAAAGATGGAGAACACGCAACTTCAAGGGCAGATCTCTTCTTCTTTCTTTGGCCTTCCTAGTTTACAGGCTGTGGCTCTAAAAGGTAATGAACTGAATGGAACCTTAGACATTGGCACCACCTACAGCAGCCAGCTGCGGTTTATTGACTTGCGGGGTAATCAAATTGATCAGTTTCGCCAAAGTGATGGTGTCCCCGAAGTCAAGATAATGCTCAAGGGCAACCCAATTTGCGAAGAAAATGGAATGGCATCACAGAATTACTGCTCCGATACCCAAGCCAATGATAACTTATATAAAACACCATTTAAAAACTGTGATCCTGGTACCTGTAGTTTGGAACAGATTCCTAGCCCCAACTGCCAATGCTCCTATCCATATACAGGAGCTTTAGTTTTCAGAGCTCCTTCCTTCTCAGACTTGGAAAACAACACTCACTACACAACCCTAGAGGAGTCTCTTATGCATTCTTTTCAATCTCATGAACTTCCTGTGGCTTCGATTTCTCTGAGCCATCCAATCAAGGATTCGGATCAGTATCTTGAATTGAGCTTACAAGTCTTCCCATCAAATCAAGATCGTTTCAATCGAACTGGGACTTCTAGCATTGGCTTTCTTCTTAGTAACCAGACATTTAAGCCTCCTAAAGAGTTTGGACCATTTTACTTCAATGCAGACAGATATGAGCACTTTGGAGCTGCAGGGCCTAGTAAATCATCCAATACTGGTGTCATAATAGGAGCAGCAGTGGGTGGTTCAATCCTTCTAGTGTTATTAATCCTAGCAGGTGTTTATGCTTGCTTCCAAAAGAAAAGAGCAGAAAGAGCAATTGATCACAACAATCCTTTCAGGCGCTGGGATAGCGAGAGCACTAGTGGTTTCCCTCAGTTGAAAGGAGCAAGGCAGTTCTCGTTTGATGAGATTAAAAAGTACACTTCTAATTTTTCTCAAGCTAACAATATTGGAACTGGCGACTACGGGAAGGTTTATAAGGGAACTCTTCCAAATGGGCAACTGGTAGCCATAAAACGAGCTCAAAAAGAATCTGTGCAAGGAGCATTTGAATTTAAAGCAGAGATTGAACTTCTATCTAGAGTCCACCATAAAAATCTTGTTGGTCTTTTAGGATTCTGCTTTGAGAAAAGAGAACAAATGCTTGTCTATGAGCATGTTTCAAATGGGAGCCTGAAAGATACTCTCTCAGGGAAATCAGGATTTAAATTGGATTGGATCAGAAGGCTAAAAATTGCCCTTGGTACTGCCAGGGGTTTGGCTTACCTTCATGAACATGCCAACCCTCCTATCATACACAGGGACATTAAATCAAATAATATTTTACTGGATGAGCGCTTGAATGCAAAGGTTGCTGATTTTGGTCTTTCCAAGTCTATGGTTGATACTGAAAAAGATCACATTACCACTCAAGTTAAAGGAACACTGGGCTATTTGGATCCAGAGTATTACATGTCTCAACAATTAACTGAGAAGAGTGATGTTTACAGCTTCGGAGTGCTATTAATGGAGCTGATAACTGCAAGAAAACCTATAGAAAGAGGGAAATATATAGTAAAAGAGATCAAAAGTGCAAATGATAAGACGAAAAATCTATGCGGTCTTTATGAATTCCTGGACCCCACCATGGATTTAGGGTCAACACTGATTGGTTTTGAGGTGTATGTAAATCTTGCACTGAAGTGTGTGGAGGAGTCAGGTGATGACAGACCTAGAATGAGTGATGTGGTAAAACAAATTGAAAACTTGTTGCTCTTAGCTGGTGCTAACCCCAATGCAGAATCAGCATCCACTTCAGCTAGTTATGAGGATATCAGTAAAGGAAGTTCTCGTCATCCTTACAGCAATGAGTCCCTTGATACAGGTGTAGTGCTTCCAAATCCAAAGATTGAGCCTATGTAA 2838 0.4116 MGGRILVFILLVCNYLLIAVADTATEDLTALKSLMDTWQKTPPNWVGSDPCNGWDGIKCTNSHVISISLSSTGLAGQLSGYIGSLSELETLDLAGPLPQTIGNLKKLSTLILVGCSFNGPIPEEIGNLQELLFLSLNSNKFVGHIPPSIGNLSNLYWLDLADNQLEGPIPVSSSSKPGLDMLHHAKHFHCGNNNLSGPIPPKLFSSEMNLIHVLFENNQLSGSIPTTLGLVQSLEVVRLDSNSLSGLVPQNISSLVKVQEMYLSNNKLSGSLPNLIGMSVLSYMDVSNNSFTSWDFPSWLSTMQSLTTLKMENTQLQGQISSSFFGLPSLQAVALKGNELNGTLDIGTTYSSQLRFIDLRGNQIDQFRQSDGVPEVKIMLKGNPICEENGMASQNYCSDTQANDNLYKTPFKNCDPGTCSLEQIPSPNCQCSYPYTGALVFRAPSFSDLENNTHYTTLEESLMHSFQSHELPVASISLSHPIKDSDQYLELSLQVFPSNQDRFNRTGTSSIGFLLSNQTFKPPKEFGPFYFNADRYEHFGAAGPSKSSNTGVIIGAAVGGSILLVLLILAGVYACFQKKRAERAIDHNNPFRRWDSESTSGFPQLKGARQFSFDEIKKYTSNFSQANNIGTGDYGKVYKGTLPNGQLVAIKRAQKESVQGAFEFKAEIELLSRVHHKNLVGLLGFCFEKREQMLVYEHVSNGSLKDTLSGKSGFKLDWIRRLKIALGTARGLAYLHEHANPPIIHRDIKSNNILLDERLNAKVADFGLSKSMVDTEKDHITTQVKGTLGYLDPEYYMSQQLTEKSDVYSFGVLLMELITARKPIERGKYIVKEIKSANDKTKNLCGLYEFLDPTMDLGSTLIGFEVYVNLALKCVEESGDDRPRMSDVVKQIENLLLLAGANPNAESASTSASYEDISKGSSRHPYSNESLDTGVVLPNPKIEPM 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g0495 945 SUPERFAMILY Protein kinase-like (PK-like) 609 907 IPR011009 -
Prci11g0495 945 FunFam Leucine-rich repeat protein kinase family protein 175 274 - -
Prci11g0495 945 MobiDBLite consensus disorder prediction 905 934 - -
Prci11g0495 945 FunFam Leucine-rich repeat family protein 26 174 - -
Prci11g0495 945 CDD STKc_IRAK 629 895 - -
Prci11g0495 945 Gene3D Transferase(Phosphotransferase) domain 1 699 911 - -
Prci11g0495 945 Gene3D Ribonuclease Inhibitor 21 173 IPR032675 -
Prci11g0495 945 SMART serkin_6 623 898 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g0495 945 ProSiteProfiles Protein kinase domain profile. 623 896 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g0495 945 ProSitePatterns Protein kinases ATP-binding region signature. 629 651 IPR017441 GO:0005524
Prci11g0495 945 Gene3D Ribonuclease Inhibitor 174 276 IPR032675 -
Prci11g0495 945 FunFam Leucine-rich repeat protein kinase family protein 588 698 - -
Prci11g0495 945 ProSitePatterns Serine/Threonine protein kinases active-site signature. 743 755 IPR008271 GO:0004672|GO:0006468
Prci11g0495 945 SUPERFAMILY L domain-like 58 367 - -
Prci11g0495 945 MobiDBLite consensus disorder prediction 905 945 - -
Prci11g0495 945 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 699 908 - -
Prci11g0495 945 Gene3D Ribonuclease Inhibitor 277 412 IPR032675 -
Prci11g0495 945 Pfam Protein kinase domain 624 888 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g0495 945 PANTHER RECEPTOR-LIKE PROTEIN 55 31 894 - -
Prci11g0495 945 Gene3D Phosphorylase Kinase; domain 1 595 698 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g0495 Prci-Chr11 5147051 5155478 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g0495 1 944 Receptor kinase-like Gene Family AT5G49760 54.906 0.0 962
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Prci11g0495 Pkinase 1.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g0495 - - gmx:100811702 1308.12