LGRPv2

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci11g0491	ATGGAAAGCATACCGCACCCAATACCGAGAACAGTAGAGGAGGTTTTCAGCGACTTCAAGGGAAGAAGAGCTGGACTGATTAAGGCCCTCACTACTGATGTTGAAAAGTTCTACCAGCAGTGCGATCCTGAGAAAGAGAACTTGTGTCTATATGGATTACCAAATGAAACATGGGAAGTGAATTTGCCTGTTGAGGAAGTACCTCCTGAACTTCCTGAGCCAGCATTAGGTATAAACTTCGCGAGGGATGGGATGCAAGAGAAGGATTGGTTGTCACTGGTTGCAGTTCACAGTGATTCTTGGCTGCTTGCTGTGTCTTTCTATTTTGGTGCTCGTTTTGGATTTGGTAAGAATGAAAGGAAAAGGCTTTTTCAGATGATAAATGATCTCCCAACCATATTTGAAGTTGTGACAGGAAGCGCCAAGCAATCAAAGGATCAGTCAGCTGCTCACAATAATGGTAGCAAAAGCAAGTCAAGCGGGAAGGTGTCATCCCAATCTGACTCTCAGGCCAAGGGAGTGAAGATGTCTCCCCCTCCCAAAGAAGAGGATGAGAGTGGAGAAGAAGAAGAAGATGATGATGAACAGGGGGCAACGTGTGGAGCATGCGGTGATAATTATGGCACTGATGAGTTCTGGATCTGTTGCGATATATGTGAGAGATGGTTCCATGGCAAATGTGTGAAAATCACCCCTGCTAAAGCTGAGCACATCAAGCAATACAAGTGCCCTAGCTGCAGTAACAAGAGGGCTAGAGTTTAG	762	0.4554	MESIPHPIPRTVEEVFSDFKGRRAGLIKALTTDVEKFYQQCDPEKENLCLYGLPNETWEVNLPVEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDSWLLAVSFYFGARFGFGKNERKRLFQMINDLPTIFEVVTGSAKQSKDQSAAHNNGSKSKSSGKVSSQSDSQAKGVKMSPPPKEEDESGEEEEDDDEQGATCGACGDNYGTDEFWICCDICERWFHGKCVKITPAKAEHIKQYKCPSCSNKRARV	253

Showing 1 to 1 of 1 entries

Show entries

Search:

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Prci11g0491	253	MobiDBLite	consensus disorder prediction	142	173	-	-
Prci11g0491	253	CDD	PHD_AL_plant	200	249	IPR044104	-
Prci11g0491	253	FunFam	PHD finger alfin-like protein	192	248	-	-
Prci11g0491	253	Pfam	Alfin	11	139	IPR021998	GO:0006355\|GO:0042393
Prci11g0491	253	ProSiteProfiles	Zinc finger PHD-type profile.	197	249	IPR019787	-
Prci11g0491	253	Gene3D	Zinc/RING finger domain, C3HC4 (zinc finger)	189	248	IPR013083	-
Prci11g0491	253	MobiDBLite	consensus disorder prediction	142	198	-	-
Prci11g0491	253	MobiDBLite	consensus disorder prediction	183	198	-	-
Prci11g0491	253	SUPERFAMILY	FYVE/PHD zinc finger	188	250	IPR011011	-
Prci11g0491	253	ProSitePatterns	Zinc finger PHD-type signature.	200	246	IPR019786	-

Showing 1 to 10 of 13 entries

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci11g0491	Prci-Chr11	5079229	5085010	Dispersed/Tandem

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci11g0491	1	250	Alfin-like Transcription Factor Family	AT1G14510	83.600	2.17e-135	380

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	Alfin-like	Prci11g0491		Alfin	1.9e-69	No_clan

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci11g0491	K26274		-	gmx:100807826	449.514

Showing 1 to 1 of 1 entries