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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Prci11g0490
ATGGAAAGCATACCGCACCCAATACCGAGAACAGTAGAGGAGGTTTTCAGCGACTTCAAGGGAAGAAGAGCTGGACTGATTAAGGCCCTCACTACTGATGTTGAAAAGTTCTACCAGCAGTGCGATCCTGAGAAAGAGAACTTGTGTCTATATGGATTACCAAATGAAACATGGGAAGTGAATTTGCCTGTTGAGGAAGTACCTCCTGAACTTCCTGAGCCAGCATTAGGTATAAACTTCGCGAGGGATGGGATGCAAGAGAAGGATTGGTTGTCACTGGTTGCAGTTCACAGTGATTCTTGGCTGCTTGCTGTGTCTTTCTATTTTGGTGCTCGTTTTGGATTTGGTAAGAATGAAAGGAAAAGGCTTTTTCAGATGATAAATGATCTCCCAACCATATTTGAAGTTGTGACAGGAAGCGCCAAGCAATCAAAGGATCAGTCAGCTGCTCACAATAATGGTAGCAAAAGCAAGTCAAGCGGGAAGGTGGCCAAGGGAGTGAAGATGTCTCCCCCTCCCAAAGAAGAGGATGAGAGTGGAGAAGAAGAAGAAGATGATGATGAACAGGGGGCAACGTGTGGAGCATGCGGTGATAATTATGGCACTGATGAGTTCTGGATCTGTTGCGATATATGTGAGAGATGGTTCCATGGCAAATGTGTGAAAATCACCCCTGCTAAAGCTGAGCACATCAAGCAATACAAGTGCCCTAGCTGCAGTAACAAGAGGGCTAGAGTTTAG
741
0.4548
MESIPHPIPRTVEEVFSDFKGRRAGLIKALTTDVEKFYQQCDPEKENLCLYGLPNETWEVNLPVEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDSWLLAVSFYFGARFGFGKNERKRLFQMINDLPTIFEVVTGSAKQSKDQSAAHNNGSKSKSSGKVAKGVKMSPPPKEEDESGEEEEDDDEQGATCGACGDNYGTDEFWICCDICERWFHGKCVKITPAKAEHIKQYKCPSCSNKRARV
246
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Prci11g0490
246
Gene3D
Zinc/RING finger domain, C3HC4 (zinc finger)
182
241
IPR013083
-
Prci11g0490
246
Pfam
PHD-finger
193
242
IPR019787
-
Prci11g0490
246
Pfam
Alfin
11
139
IPR021998
GO:0006355|GO:0042393
Prci11g0490
246
ProSiteProfiles
Zinc finger PHD-type profile.
190
242
IPR019787
-
Prci11g0490
246
SMART
PHD_3
192
240
IPR001965
-
Prci11g0490
246
SUPERFAMILY
FYVE/PHD zinc finger
181
243
IPR011011
-
Prci11g0490
246
PANTHER
CPG BINDING PROTEIN
9
245
IPR045104
GO:0006355|GO:0042393
Prci11g0490
246
MobiDBLite
consensus disorder prediction
144
160
-
-
Prci11g0490
246
FunFam
PHD finger alfin-like protein
185
241
-
-
Prci11g0490
246
ProSitePatterns
Zinc finger PHD-type signature.
193
239
IPR019786
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Prci11g0490
Prci-Chr11
5079229
5085012
Dispersed/Tandem
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Prci11g0490
1
243
Alfin-like Transcription Factor Family
AT1G14510
81.124
1.47e-133
375
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
Alfin-like
Prci11g0490
Alfin
1.8e-69
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Prci11g0490
K26274
-
gmx:100807826
439.499
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